Oryzias melastigma (Indian medaka): 112148104
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Entry
112148104 CDS
T07439
Name
(RefSeq) junction-mediating and -regulatory protein isoform X1
KO
K24045
junction-mediating and -regulatory protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148104
Membrane trafficking [BR:
oml04131
]
Autophagy
Other autophagy associated proteins
Others
112148104
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
112148104
NCBI-ProteinID:
XP_024130672
Ensembl:
ENSOMEG00000005183
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Position
LG9:complement(19698151..19710459)
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AA seq
865 aa
AA seq
DB search
MSFTMEESLESGWVAVRPNAFEEKEKHKFVFIVAWNEVEGKFAITCHNRTVQRRSLGRDP
LSAVTSLDEDKTKWPESPTRDKVSRSPSKGADEAAGKRCSAKAEFMLTRPAKTQTAVSTC
AEEHLFASMDSLDLEEASREDCSWAGLFSFQDLRSVHQQLCSVNSVLEPCLPDFPEEPAG
MWTVLFGPAEVSRTEMDELCLRLQVYLGHALDTCGWKILSQVLFTENDDPDEYYESLSEL
RQSGYEDALNRARKHLQELLDKHKSTESMVELLELYEQEDRAYGGLLEASTQLHQYLLQP
FRDMRELAMLRRQHIKISLENDYLGPRRIAALQKEDSDWQKKAQEAVLNIQEFTVKYFEI
TARAQKGVYERMKLDQRKFGKSSWTAAVGRMERLRYSVAKETLQLQRAREISLEQRKHAL
REEMQGLCSSDDAMTLLDHLETQYYELQLQLYEIQAEILQCEELLLSAQLDSIHRQMTER
QNEVVYYDTFESADDITEVDTDEREELRRLRVSARQLEARRGRITAKRSYLRNKREICVS
NHNEKQQRRQTIHKDLVCLQLKMETDEDEEMKNSRVSQERQKTLDRLRSFKQRYPGQVIL
KSSRLSAALTRRKQRGRSAEATAVDESEECVGSVSVQTVGQPLCLSTSVQTDPSATLTTQ
PVATLTASVPPLPVPSPADSSCSPCSLSSLLGSPVSPPPPPPPPPPPPAKEQSLASESPR
LKSAELLLTPLGPFVPRFFDSSQLVSARKKLRKVPEFEAHSRRVSSPMDEVLASLKRGSF
HLRKVDQRPPPPSKSDDDPNSILVQIRRGVKLKRVPCKDRKDQKELSASTDPLTRSIHEA
LRRIKEASPESDSDDDGVAGLDWES
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcacaatggaggagagtttggagtccgggtgggttgccgttcggccgaatgcg
tttgaggaaaaggaaaagcataaatttgtttttatcgtcgcctggaatgaagttgaaggg
aaatttgccataacgtgtcataacaggaccgtccagaggagaagcctgggaagggaccct
ctgtctgcggtgacgagcctggatgaagacaaaacaaaatggcccgaaagtcccacccgg
gataaagtgtctcgaagtccgagcaaaggagccgacgaggctgctggtaaacgatgtagc
gctaaagcagagtttatgctaacgcgccccgccaaaacccagacagccgttagcacctgc
gcggaggagcatctctttgcctccatggactccttggacctggaggaggcgagccgagag
gactgcagctgggccgggctgttctccttccaggacctccgttccgtccaccagcagctg
tgctcggtcaactcggttctggagccgtgtctgccggacttcccggaggaacctgcgggg
atgtggacggtcctgttcggccccgcggaggtgtcacggacagagatggacgagctgtgc
ctccgcttgcaggtgtacctggggcacgcgctcgacacctgcgggtggaagatcctgtcg
caggtgcttttcacggaaaacgacgacccagacgagtactacgagagtctgagcgagctg
aggcagtccgggtacgaggacgctttaaaccgagcgagaaaacatctgcaggagctgctg
gacaagcacaaaagcacagagagcatggtggagctgctggagttatatgagcaggaagac
cgggcctacggaggcctgctggaggcctccacacagctgcaccagtacctgctgcagccg
ttcagagacatgagggagctcgccatgctacggagacagcacatcaagatttctttggaa
aatgactacttgggtccgagacgtattgcagctttacaaaaggaggactctgactggcag
aagaaggctcaggaggcagtcctgaacatccaggagttcaccgtaaaatactttgagatc
actgccagagcccagaaaggagtttatgagcgtatgaaactggaccagagaaagtttggg
aaatcttcatggacagcagcggtggggcgcatggagagactgcgctactctgttgccaag
gaaacgctgcagctccagagagccagggagatcagtttggagcagcggaagcacgcactc
cgagaggagatgcaaggtctgtgcagcagtgacgacgcgatgaccctcttagaccacctg
gagacgcagtactatgaactccagctccagctgtatgaaatacaggcggagatactacag
tgtgaggagctgctgctatccgcccagctggacagcatccacagacaaatgacagagcgt
cagaatgaggtggtttactatgacacgtttgaaagcgcagatgatatcacagaagttgat
actgatgagagagaagagctccgccgccttcgggtcagcgctcgacagcttgaggcgagg
cgaggccgcatcactgccaagcgctcctatctgaggaacaaacgggagatttgtgtttcc
aatcacaatgagaagcagcagagacgccaaactatccacaaagacctcgtctgcttacag
ctgaaaatggaaacggatgaagatgaggaaatgaagaacagcagagtaagtcaggagagg
cagaaaactctggacagactgcgttctttcaaacagcgatacccaggtcaggttattcta
aagtcctctcggctcagtgctgccctcaccagaagaaagcagcgaggccgaagcgctgag
gccacagccgtggatgagagcgaggagtgtgtgggctctgtgagcgtgcagacggtaggc
cagcccctgtgtctcagcacaagcgtgcagacggaccccagcgccacgctcaccactcag
cccgtcgcaacgctcacagcatcggtacctccgctgccggtgccgagcccggcagactct
tcttgctccccttgctccctttcctcgctgttaggctcccctgtttctccgcctcctcca
cctcctcccccacctccacctccagctaaagagcaatcattggcttctgaaagcccgagg
ctaaagagtgcagaactcctgctcacgccactcggtccattcgtgcctcgcttttttgac
agcagccaactggtgagcgcgcggaagaagctgaggaaagttccagagtttgaagctcac
agcaggagagtgagttcccccatggatgaggtgctggcctccctgaagagaggcagtttt
cacctgaggaaggttgaccaacgccccccgcctccttccaagagcgacgacgatcccaac
agcatcctggttcagattcgcagaggggtgaagctgaaacgcgttccctgtaaagacaga
aaagaccagaaagagctctctgcatccaccgaccccctgaccaggagcatccacgaggcg
ctgcgccgcatcaaggaggcctccccagagtcggactcggacgacgacggagtggcaggc
cttgactgggaaagctaa
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