Oryzias melastigma (Indian medaka): 112148116
Help
Entry
112148116 CDS
T07439
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112148116
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
112148116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
112148116
NCBI-ProteinID:
XP_024130694
Ensembl:
ENSOMEG00000003671
UniProt:
A0A3B3BBY2
LinkDB
All DBs
Position
LG9:complement(32518379..32531230)
Genome browser
AA seq
667 aa
AA seq
DB search
MMETIKKSPFSKKISLETPPSPVNISTPVKKKKKKDKEIVSPSIDVPSSHKKKEKKREYE
DFKPLFDSDELTISHNKNNKKKKINKEIFSPSIDVPSNHKKKRKKKRDEEEEDFKPLSDS
DELIDSHTKKRKKEGEVSISISGDELMVKKKKKENLMDNSEKEGSIARETEKRKNRNTNR
LNKDEVVVATVSKHKDSSIDAAARNTKKKKKKKDETDVEGNSQEEETPKHKKSKQASSAM
AAEHVNNEMDVTVSLETSISSSATKNDGIRKKSWKERAAAKQTKRGKSLSRNKTVSSMNE
LDLDLVGQLEEFVPDVRNKSAPEIMKLLRYDLHRFRDFKQKGVPLRSGRFTVPENHQIEQ
NMADFIALTNMGSAEQVLFPQRFKEQAPKIRKLKILHCFFEKIAEGIPRPCHQVYTRAKK
IFDIRNHMGRFSEDELHSLQKLHQLHGNDWKAMSDKMDRSVYALQKRFVCLAPAHGPWSE
DEESRLKQAIRDHLETVFQESLGSGLTMDQLCSNLPWQKISQKVETRHWNQCRLKWFNLL
NKITKGKLPRGPEGYKAKILLINTLFSMSVDDLADIEWDEVACAVGNVTPMCVQRMFHRL
KVTKVPNWSRMSYGDIITFLKDHVVPALQEKLSSCSSTPDSQEPQEEVKYQLSQILSTDN
DLEVDNT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacgatcaaaaagtcacctttctcaaagaaaataagtcttgagactcctcct
agtcctgtcaatatcagcactccagtgaaaaagaagaaaaaaaaggataaagaaatagtt
tctccttctattgatgttccttcaagccacaagaaaaaagaaaagaaaagagaatatgag
gacttcaaacctttatttgattctgatgaactgacaatcagccataacaagaataataag
aaaaagaaaattaataaagaaatattttctccttctattgatgtaccttcaaaccacaag
aaaaagagaaaaaagaaaagagacgaagaggaagaggacttcaaacctttatctgattct
gatgaactgatagacagtcatacaaaaaagaggaaaaaggagggggaggtcagcatctcc
atctctggtgatgaactgatggtcaaaaaaaagaagaaagagaatttaatggacaactcg
gagaaggaagggagtattgcacgtgagacggagaaaagaaaaaatagaaacaccaacaga
ctgaacaaagacgaggttgtcgtggcaacggtcagcaagcataaagactccagcatcgac
gctgcagccagaaatacaaagaagaagaagaagaagaaagatgaaactgatgttgaggga
aattcacaggaagaagagacgcctaaacacaagaagtcaaaacaggcgagcagcgccatg
gcagcagaacatgtaaacaacgagatggatgtgactgtttctctggaaactagtatcagc
agctcagccacgaaaaacgatggaatcagaaagaagtcatggaaagaaagggctgctgca
aaacagactaagcgtggaaaaagcttgagcagaaataaaactgtatcttctatgaacgag
ttggacttggatctcgtcggtcagctggaggagtttgtcccagatgtcaggaataaatct
gctcctgaaattatgaagttgctacgatacgatctccatcgcttcagggactttaaacag
aaaggtgtgcccctccgctcgggacgattcacggttccagagaatcatcaaattgaacaa
aacatggcagactttattgctctgacgaatatgggttcagccgaacaggttctgttccct
caaaggttcaaagaacaagcaccaaagatccggaagctgaaaatcctgcattgctttttt
gagaaaattgcggagggcatccctcggccctgccatcaagtctacacgcgagcaaagaag
atctttgacatccggaaccacatgggaaggttctcggaggatgagctccattccctccag
aagctccaccaactccacggcaacgactggaaagcaatgtcggacaagatggaccggagc
gtctacgcgctgcagaagcgcttcgtttgtctcgctcctgcacacggcccgtggagcgag
gacgaagagtcccggctgaagcaggctatccgggatcacttggagactgtgttccaggag
agtttaggttctggtctgaccatggaccagctctgcagcaacctgccatggcagaagatc
agccagaaggttgagaccagacactggaaccagtgccgtctgaagtggtttaaccttttg
aataaaataacgaagggcaaattgccaagaggacctgaaggttataaggccaaaatcctt
ctaataaacacgttattctccatgtccgtggacgacctagcagacatcgaatgggatgaa
gtggcttgtgctgttggcaatgtaacccccatgtgtgtgcagaggatgtttcacagactg
aaggtcaccaaagtcccaaactggagcagaatgtcgtatggagacatcatcaccttcctg
aaggaccacgtggttccagctctgcaggagaagctgagctcctgcagctctacaccagac
tcccaggaaccgcaggaggaggtcaagtaccagctgtcccaaatcctcagcacggacaat
gatttagaggtggataacacttga
DBGET
integrated database retrieval system
