Oryzias melastigma (Indian medaka): 112148189
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Entry
112148189 CDS
T07439
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112148189 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112148189 (nipbla)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
112148189 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
112148189
NCBI-ProteinID:
XP_024130827
Ensembl:
ENSOMEG00000000744
LinkDB
All DBs
Position
LG9:15203517..15229994
Genome browser
AA seq
2546 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPVLLQTILARHPGIFREKNVMQQPMVPP
FKVTQNSMHSPAQPANFQPAAISPNPSSRFVAPPSGSSSRYMGQQSSPVPSPYTPQSPAP
GYIQQYPHQQPPSYNQHQQIQQVSVASPLVPGGMRNIHEGKVSGQMASAPNHHPDRHEDY
LNIVQRLGSEEGDSTLRNPSFPLRSPQSGCSPASSDGTPKSGSRPPLILQSPLPYAPSPR
EGGPDHKQLLQQRKKVPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNGSDPPGDGVSG
MDQNSDNMEADLGFQHVPVLQQNLAARLHPQQLSQQAGGASGLQPPSSPYDAAELDALAE
IERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGAPTGAPGSGSTGGGNAGK
LTPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPTSGPAA
VEGSDTALRLKPDGRPEVIKNRVEKHDSRREGRESSKHRHDEKPSDRRGEMSKSSHRGEY
GRDKDRESDRDRRHRSETGSRDRRSPDSRSRSDRDRSGFHASSTGEPGRSGNRHDGSKPA
SSAAKIPDSFPAHLLGGHSGALKNFQIPKINREKDVSGSTESQMWVQPKVKLERLGLVRD
FEKRPKPVVVLKKLSVDQIQRIIRHSKSGKNRFSSKSSKSGMDPAVLKELPPELLAEIES
TMPLCERVKMNKRKRSTVNEKPKYAEVSSDDDPDANGESARKRHRRDKDRAWEFEERERR
GSGEHRKSGHKDGRRGSGSRYRDSSEEDSPPPSMSEIARKMKMKEKQKKRKAYEPKLTQE
ELMDSSTFKRFLASIDNILDSLEDVDFTTMAADDDEIPQELLLGKHQVNELGSESAKIKA
MGITGRIPSDKLVKLLNILEKNIQDGSKLSTLMNHDQDTEDEERLWRDLIMERVTKSADA
CLTALNVMTSAHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGMLSSKA
KRAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSEL
QLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMV
TALVLQLIQCVVHLPSDKDVFEEFDNKVDQDVLITNSYETAMRTARNFLSVFLKKCGSKQ
GEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYL
GTVASRLRKDAVTSKMDQRSIDRILQQSPGSDETQQLQKALLDYLEENAETDPSLVFARK
FYVAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEMETTGEIMQRAERRKKFLRGIIK
TTPTHFATLKMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKA
MKCLSEVVAVDPSILARSEMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDM
LIERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKLVNETFQK
LWFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACV
QLVDNLVEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTK
CNTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGA
VVNKVTHNYKFVMACFNKFYTALNKLKLQHQEDPNSTTLVANKPFLLRSLFTVGALARHF
DFDLEEFKGNNKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFVPEVKS
LYNGILADGSSSINLKIQVLKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGM
SSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTM
RNKADQQLVEIDKKYTGFIHMKAVAGMKMSYSLQQAINSSRKTIIRGFRHDETHTALCSH
LYTMIRGNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPYQSQEEPLFIMHHID
ITLSVSGSNLLQTFRELLLKEPRRKEKKPKEWVNTSDGEDKEEDMNCNSPRSEKEQNSNS
EIEDDEDEDVVRRPKKTRKPIANSSESESDFEDLAVEDADKVMRLLPDNPTGLLDFANAV
QGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKNNVHFHPRQTIDFISNN
MAHASLTEDVKRRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPM
SGPSPRNQAGPETDDDDSDSEERTPGSSRKSRRAGDSSDPGRMSEIVDVMDVIALWCPKY
KDRPQIARVVQKSPSGYTIHWMAGSYSGPWAEAKKRDGRKVVPWVDTIKESDIIYKKIAL
TSNHKLSNKVVQTLRSLYAAREGGTS
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctggtatcgctagcctcaca
gacttgttgaaccagctgcccctcccctctcctctacctgccaccaccactaagagcctc
ttattcaatgggagaatcgcagaggaagttacttgtctcttgggctgtcgagatgaaaat
cttgcctcccaactagctcatggcctcaaccaggtctccacagagcacatagagctaaag
gacaaccttggtagcgatgagccagagggagatgcaccagtgttgttgcagaccatactt
gccaggcaccctggcatcttcagggagaaaaatgttatgcagcagccaatggtacctcca
ttcaaggtcacccaaaattccatgcatagccctgcccaacccgcaaacttccagccagct
gcaatttctcccaatccatcaagtcgttttgtggcgccgccatcaggttcaagtagtcgg
tacatgggccagcaaagcagtccagtaccgagcccctacactcctcagagtcctgctcct
ggttacatccagcagtatccccatcagcaacctcccagttacaaccaacatcagcagata
caacaagtgtctgtagcaagtccattggtgcctggtggaatgcgaaatatccacgagggc
aaagtgtcgggacagatggctagtgctcccaatcaccatccagacagacacgaagattac
ctgaacattgtacaacgcctgggcagtgaggagggtgactcaaccttaaggaatccatct
ttccccctgaggtctccacagtcaggctgctctccagcctccagcgatgggacacccaaa
tcgggatctcgaccaccactgatactccagtcgccgcttccatatgcgccctcgccgagg
gaaggaggacccgaccataagcagctgctgcaacaacgaaagaaagtccctgcagtgaaa
gaggagaaagacatgtacgacattgttagctcgccaaacaaggactctacgaaactcacg
cttaagctgtctcgggtcaagtcaaacgggtccgatcctccaggagatggtgtgtcagga
atggatcagaattccgacaatatggaagcggatcttggatttcagcacgttcctgttctc
cagcaaaatcttgccgctcggttgcatccgcagcagctttcccagcaggcaggtggagcc
agtggacttcagcctcccagctccccttacgacgctgcagagcttgatgcccttgcagaa
attgaaaggatagaacgcgaggcagctagtgagaagtgttctaaggaggtacaagataaa
gacaagccactgaaaaagagaaagcaggactcttttccccttgagccaggtgcaggggga
ccaggtgcccccacaggtgccccaggcagtggatcaactggagggggcaatgctggcaaa
ctgacgccacaagaggccactgccgctggaaatggggccagccgccctcccctcatggtg
agcatcgacctccagcaggccggccgagctgatggccagctcgacccttgtctggccgcc
cctattcccgcccttgaagcccaacgttggccggaagaaccaactagtgggccggctgcg
gtggaaggttctgacacagctttgcggttgaagccagacggacgaccagaagtcatcaag
aacagggtggaaaagcacgacagcaggagagaaggccgagagtcttcaaaacaccggcat
gacgagaagccctcagacagacgcggagagatgtcaaagtcgtcccatcggggagaatat
ggacgagacaaggaccgcgagtctgacagggacaggaggcatcgaagtgagaccgggagt
cgagataggaggtcccccgactcccgctcccgaagcgatcgagataggtcgggcttccac
gcctcttccacgggggagcccggcaggagcggcaataggcacgatggttccaaaccggcc
tcatcagctgctaaaatccccgattctttccccgctcacctcctgggagggcatagtgga
gcactgaagaacttccagatccctaagattaatcgtgaaaaggatgtgagtgggtccact
gaaagtcagatgtgggtccagcctaaggttaagttggagaggctgggtttggtgagggac
tttgagaagcggcccaagcctgtggtggttttaaaaaagctttcagttgaccaaattcag
aggattattcggcacagcaaatctggaaagaacaggttctcgtccaaatccagcaaaagt
ggaatggacccagcagttctgaaagaactgccgccagagttgttggcagaaattgaatcg
accatgcccctgtgcgagagggtaaagatgaacaagaggaaacgaagcactgtaaatgag
aagcccaaatacgccgaggtcagctcagatgatgacccggatgccaatggagaatctgcg
aggaaacgtcaccgtcgggacaaagaccgggcctgggagtttgaagagagggaacgacgg
ggctctggggaacacaggaagagcgggcacaaagacggccggcgaggctcggggagccgc
tatcgagactcatcagaagaagattctccaccacccagcatgagtgaaattgccagaaag
atgaaaatgaaggaaaagcagaagaaaaggaaagcgtacgaacccaagcttacccaagag
gagctaatggactcatccacgttcaagagattcctggcaagcatcgacaacatactggac
agtttggaggatgtggatttcaccaccatggcagcagatgatgacgagatacctcaggaa
ttgctgctgggtaaacaccaggttaatgagctgggaagcgaatctgccaaaatcaaggcc
atgggcatcaccggcaggataccatcagacaagttagtgaagcttctaaacatcctagaa
aagaacatccaggatggatctaagctttctactttgatgaatcacgaccaagacactgaa
gacgaggaaagactttggagggatctgataatggagagagtcaccaagtctgcagacgcc
tgtctgacagctcttaatgttatgacctcagcgcacatgccaaaggctgtttacatcgag
gatgtcattgagcgagtgctacaatacaccaagttccaccttcagaacacgctgtatcct
cagtatgatcccgtctacagggtggacccacatggaggtggcatgctgagctctaaggca
aagcgtgcaaaatgctcgacacacaagcaacgtgtcatcgtcatgttgtacaacaaagtt
tgtgacatcgtcagcaacatttctgagctcttagagatccagctattgacagacaccacc
attctccaggtttcttcaatgggaattactcctttttttgtggagaatgtcagtgagctg
cagttgtgtgccattaaactagtaacagcggtgttctctcgatatgagaaacaccggcag
ctgatcttggaggagatatttacctctttagccagactgcccaccagcaaacgctctctc
aggaatttcaggttgaacagctcagaccaggatggagagccgatgtacatccaaatggtc
actgctctggttctgcagctgatccagtgtgtggtccatctccccagcgacaaagatgtc
ttcgaagagttcgacaacaaggtggaccaggatgtcttgatcaccaactcctacgagact
gcaatgagaacggcacggaacttcctctcagtcttcctcaaaaagtgtggtagcaaacag
ggagaagaggattaccgtccgctgtttgaaaactttgtccaggacctcctttcaactgta
aacaaaccagagtggcctgctgctgagctgctgctcagtctgctcggccgactgctggtt
caccagtttagtaataaacaaacagaaatggcgctcagagtggcgtctttagattacttg
gggactgtggcttctcgtctaaggaaggatgcagtcaccagcaagatggaccagagatcg
attgaccgtatcctacaacagtctccaggttctgatgaaacccagcagcttcagaaggct
ttactggactatctggaagagaacgcggagaccgatccttcgttggtgtttgctagaaag
ttttatgttgcccagtggtttcgggatgccacaacagaggcagaaaagtccatgcgaaac
cagaatccaaaggacgaagactcctctgatggaccgcaacatgcaaaggagatggaaacg
acgggggaaatcatgcagcgtgcagaaaggcgcaaaaaattcctgcgcggcatcatcaaa
actacaccgactcattttgccacactgaaaatgaactctgacactgtggactatgatgac
tcctgcctcatcgtacgttatttggcctccatgaggccgtttgcccagagttttgatatt
tatttaacacagatcttgcgagttcttggagaaagtgccattgctgttaggactaaagcc
atgaaatgtctgtctgaggttgtggctgtggaccccagcattctggcaaggtctgaaatg
cagcgcggagttcatggtcgtttgatggacaactccaccagtgtgagagaagctgctgtg
gagttgctgggcaaatttgtgctcagcagacctcagctcacagagcagtactatgacatg
ctcattgagaggatactggatactggtatcagtgtcagaaagcgagtgatcaagatcctc
agagacatctgcctggagcagccaaccttcagcaagattaccgagatgtgtgtcaagatg
attcgcagagtcaacgatgaagaaggcatcaagaaattggtcaatgagacattccagaag
ttgtggttcactccaactccagcacacgacaaagagaccatgaccagaaagattctcaac
atcactgatgttgtagctgcatgccgagacactgggtatgactggtttgagcagcttctt
caaaatctgctcaaatctgaagaagacgcttcatataagccagctaaaaaggcttgtgtt
caactcgtcgacaatctggtcgaacacatccttaaatatgaagagtctctcgcagaaaac
aaaggagtaaactcaacacggcttgtggcgtgcatcaccactctatacctcttcagcaag
atcagagctcagctcatggtcaagcatgccatgaccatgcagccatacctaacaaccaag
tgtaatactgccaatgacttcatggttatctgcaatgtggcaaagatcttggaactcgtc
gttcctctgatggaacatcccagcgaaaccttccttgctacgattgaagaagacctcatg
aagctcatcatcaaatacggcatgacggttgtccagcactgtgtgagctgtcttggagct
gttgtaaacaaagtcactcacaactacaagtttgtcatggcttgcttcaacaagttctat
actgcacttaacaagctcaagcttcaacatcaggaggaccctaacagcacaaccctggta
gcaaacaagccttttctgctgcgatcgctcttcaccgtgggcgccctggcccgacacttt
gattttgacctcgaagagttcaagggcaacaacaaggttgttatcaaagagaaagttctt
gaactgcttctttacttcaccaaacatgaagatgaggaggtcaagaccaaagcaatcatt
ggcttaggcttcctcgtgatcatgcatccaagccagatgtttgtccccgaggtgaaatct
ttgtacaatggcattttggcggatgggtcctcttcaatcaacctcaaaatccaggtcctc
aaaaacctgcagacatatcttcaggaggaagacactcggatgcaggaagcagatcgggaa
tggaagaaactctccaagcaggaggatctcaaggagatgggagacatttcttcagggatg
agcagctccatcatgcagctttatctgaagcaagtgttagaggcctttttccacacccag
tcgagtgtacggcactttgcactcaacgtcatagctctcacgctaaaccagggtctcatc
catcctgtacagtgtgtaccctacctcatagccatgggaacagacccagaacccaccatg
aggaacaaagctgaccaacaactggtggagatcgacaaaaaatacacaggattcatccat
atgaaggcagttgctgggatgaagatgtcctacagcttgcagcaagccatcaattcctct
cgaaaaactattatccgaggcttcaggcacgacgagacccacacagctctgtgctcccac
ctgtacaccatgatccgtgggaaccggcagcatcggagggcctttctcatctcgttgctg
aacctctttgatgacagtgctaagacggaggtgaacatgctcctgttcatagcagacaac
ctggcgtgttttccataccagagtcaagaggagcctctcttcatcatgcaccacatagac
atcactctgtctgtttctggcagcaacttgttgcaaactttcagagagcttcttctgaag
gagccgaggcgcaaagagaaaaagccaaaagagtgggtgaacacgtctgatggggaggat
aaagaggaagacatgaactgcaattctcccagaagtgaaaaggagcaaaacagcaacagc
gagatcgaagacgacgaggacgaagatgtggttaggcgtccgaagaagacgagaaaaccc
attgcgaacagctcggaatctgaatcggattttgaggatttggccgtggaggatgcggac
aaagtgatgaggctcctcccggacaatcccaccggactcttggattttgccaatgctgtt
cagggcattctgcttctgctggtgcttaagcaacatctaaagaatctatacggtttttct
gacagtaaaattcagaagtattctccaactgagtcggccaaggtgtatgataaggctgtg
aacagaaaaaacaacgttcacttccacccgaggcagaccatcgacttcatctccaacaac
atggctcacgcatcactgacggaggatgttaaaaggcggatagttaagcagtaccttgat
ttcaaagtgttgatggagcatctggaccccgatgaggaggatgaagagggggaggcatct
gcaagcgccaacatcagaaacaaagccataaacgcgctactgggaggcagcggccccatg
tccggtcccagcccacgcaatcaggcgggaccagaaacggacgacgacgacagcgatagt
gaagaaagaacccccgggtcgtcgcgaaaatcgaggcgagcgggggattcttcagatcct
ggtcgtatgagtgagatcgttgatgttatggatgtcatcgccctttggtgccccaaatac
aaggaccgaccgcagatagctcgagttgtccagaagagtcccagtggatataccatccat
tggatggcgggctcctactcggggccttgggcggaggccaagaaacgggacggccgcaaa
gtggtgccttgggtggacactattaaagagtcggacatcatttacaagaagattgccttg
accagcaaccacaaactgagcaacaaagtagtacagactttacgctcactatatgcagca
cgggaaggagggactagctaa
DBGET
integrated database retrieval system
