Oryzias melastigma (Indian medaka): 112148198
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Entry
112148198 CDS
T07439
Symbol
cux2b
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112148198 (cux2b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
112148198 (cux2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112148198
NCBI-ProteinID:
XP_024130848
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All DBs
Position
LG9:30762978..30895976
Genome browser
AA seq
1555 aa
AA seq
DB search
MRIFRWNWCLRTVSGKCLDSPWFSRRWTGTRLCPCCCLMELHAKQRRELNSVASELAGRQ
EESEHSHKHLIELSREFKRNVPEEVREMVAPVLKSFQAQVVALNKRSKEAESAFLGVYKQ
LIEAPDPAPVLEASHSLEERLQQLGSSAPDGEALVREISGHWKKHLECLEKTAEERLSVT
EEASESRPPASLMTPNSTPAPGAPSSPGQDYPNRGEEEEEEEESTDAGSADRLSEAEEKI
KVLHASLSAAQAELLDLRCKYNQEMANKAAEIDAMMANLEKANQRAEVAQREVERLKEKL
ASGSGDAAASCQPEEGASRAKNDKVDTLPSQLEATLLAKDRENLRLLENIQRLQFALQEV
QETSANQILELERQLAYKTEAIERLEAKLQSQMDYEEIKTELSILKVLKLASANGSSSQD
SAKAAEALLLDKEAFLPSHKYLLEKTRVLHSNGSDHSEEVGRETGRPPGSHSSSSQADSR
ASPSPGLPPLDGSSSSHDLPRPFSVSPCSGDRLSGDHILHKQLLSPHFKKDGLMAFPTAL
YAAKVALMSATQGSAGVGSGDASLPSDQSESGSSTAGDDDQLDTAEIAFQVKEQLLKHNI
GQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVR
QRGSITPRIRTPETGSDDAIRNILEQAKKEIQSQRGGDGRSSLHSSSGRNSNGAGSSSDE
TIKNILEQARREMEAQQQALMEMEACGRASNASSGIQVERLGPPERSRVFPLPISVKQEE
GGCVTVCMANSISSPQTPLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSQERGSMVLG
GGNGSQPYSSVSPSLSSSSSGPSAMTRPWPRLENGEGLPNSEEASAAEDDLGRPVEVKVE
SDTSVSGESPGPGRLSYYPAYIPRALKPTVPPLTPEQYEMYMYREVDTIELTRQVKEKLA
KNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQSLSQP
TNQSHTQDKSPVTTQASPSPPPSPAESHPSPLAEPASLSLESSKENQQPESLSIGLPTHP
EGGKSTSSLMTLHQPTNPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGETILG
LTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYG
LLSTGSDSDSPSTRSECVSPASASLDLCPFNQVKKPRVVLGAEEKEALRKAYLLEPYPSQ
NTIEMLASQLSLKTNTVINWFHNYRSRMRREVLMEGLPDNDTDAEHHSYSPSVTRSPHSD
GEEKRLQQRPGRTPSIFNPHSNAGSPHVKQEAAEGEDNRDGEEDGLMKLSREQCFSSAVS
LPLLKTEHEHSITDCCEANLAGQSLKQEEGVSSQGQGLYPGAVSMDGPQRAKQARQDGEE
SVKPTVDPVSFKASSEPCRSSLEVSLNSPSAASSPGLMMSVSPVPSSSAPISPSLPNPPS
TSTNPSQDTNPIPSFQGPKLNRSTQRRNEKMANLNNIIHRLEKAANREETLEWEF
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctttcgttggaactggtgtttacgaacagtgtcaggaaaatgcctggactca
ccatggttcagtaggcgctggacggggaccaggctgtgtccttgctgctgtttgatggag
ctgcacgccaaacaaaggagggagctaaactctgtggcgtctgagctggcgggtcgacaa
gaggagagcgaacattcccacaagcacctgatagagctgagcagggagttcaagagaaat
gtccctgaggaggttcgggagatggtggcacctgttctcaagagttttcaagcccaggtg
gttgctctgaacaagcgcagtaaggaggcagagtctgcattcctgggagtctacaaacag
cttatcgaggctccagatccagctccggtgctggaggcctcccattccctggaggagaga
ctgcagcagcttgggagttcggccccggacggcgaagcgctggtgcgggagatcagcggg
cactggaagaagcacctggagtgccttgaaaagacagcagaggagcgtctttctgtgaca
gaagaggcatcagagtccagacctccagcctccctgatgacccccaacagcacaccggct
cctggggccccgagctctcctggccaagactaccccaaccgaggggaggaggaggaggag
gaggaggagagcactgatgctggctcggctgacagactatcagaggccgaggagaagatc
aaagttctgcatgcatccttgagtgcagcacaggcggagctgctggacctgcgttgtaaa
tacaaccaggagatggcaaacaaggctgctgaaatcgatgccatgatggcaaaccttgag
aaggcaaaccagagagcagaagtggcccagagggaagtggagaggctgaaggagaagtta
gccagcggttctggtgacgccgccgccagctgccaaccagaagagggagccagcagggcc
aagaacgacaaggtcgacacattgccttcccagctggaggccaccttgttggccaaagac
cgcgaaaacctcagacttcttgaaaatattcaacggctgcaatttgcactacaggaagtt
caggaaacctcggccaatcagatcttggagcttgagcggcagctggcgtacaagacagaa
gctatagagagattagaggctaaactacaatcccagatggactatgaagagattaaaact
gaactcagcatcctaaaagttctgaaactggcttctgcaaatggcagctcatcccaggat
tctgctaaagctgctgaagctcttctgctggataaagaggcctttcttccatctcacaag
tacttactggagaagaccagagtattgcacagcaatggtagtgaccactctgaggaagtg
ggaagagagacaggccggccacctggctctcactcctcttcctctcaggccgacagtcgt
gcctctcccagcccaggtctcccccccctggacggctcctcttccagccacgacctcccc
cgccccttctcggtgtcgccgtgctctggggaccgactgtcaggggaccacattcttcac
aagcagctcctctccccgcatttcaaaaaggacggcctcatggctttccccaccgcgctc
tatgcagccaaagttgctctcatgtcagccactcaagggtcggcgggcgtgggcagcggc
gacgccagcctgccgagtgaccagtcagaaagtggcagctcgaccgcaggagatgacgac
caactggacacggcagagattgcctttcaggtgaaggagcagctgctgaagcataacatt
ggccagcgagtgtttggccactatgtgctgggtctctctcagggctcagtcagtgagatc
ctggccaggcctaagccctggaggaaactgacagtcaaagggaaagaaccttttatcaag
atgaagcagttcctctctgatgaacagaacatcctggccctcagaaccatccaggtcaga
caaagagggagcatcactccacgcatccgaactcctgaaactgggtcagacgacgccatt
aggaacatcctggaacaggccaagaaggagatccagtctcagaggggaggtgatggcagg
tcctctttgcacagctcatctggcaggaacagcaacggggcaggaagcagctcagatgaa
accattaagaacatattagaacaggctagaagggagatggaggctcagcagcaggccctg
atggagatggaggcctgtggaagagcctccaatgccagttcaggaatccaagtggaacgt
ctggggccgccggagcgatccagggttttcccgttacccatctctgtcaagcaggaggag
gggggctgtgttacagtgtgcatggccaactccatcagcagcccccaaacaccgctcagc
gttctttcccccgccgcttttgttcagaacatcatccgtaaagttaagtcagaaatcggt
gaagcgggaacctactttgatcaacactggtctcaggagcgggggtccatggtcctcggc
ggggggaacggctcccagccctatagttccgtgtctccctctctttcctcttcctcctct
gggccctctgccatgacccggccctggccgcgcctcgagaacggcgagggccttcccaac
agcgaggaggcctcggctgcggaggacgatctgggccggccggtggaagtgaaggtggag
tcggacacctcggtgagcggggagtccccgggcccgggacgcctgtcctactacccggca
tatattcctcgggcactgaagcccaccgtgcccccgctgaccccagagcagtatgagatg
tacatgtatcgggaggtggacaccatcgagctgaccaggcaggtgaaggagaagctggcc
aagaacggcatttgccaaaggatctttggtgaaaaggtgctggggctctctcagggcagc
gtcagtgacatgctgtctcgacccaaaccctggagcaagttgacccagaaaggcagggag
cccttcatccgcatgcagctgtggctgctggatcagctcggccagagcctcagtcaaccc
acaaaccaaagccatactcaggataaaagcccagtgacgacccaggcctcaccttccccg
cctcctagcccggcagagagccaccccagtcctctagctgagcctgcaagcctctcctta
gagagcagcaaggagaaccagcagcctgagagtctaagcattgggttgcccacccaccca
gagggagggaagtccacctcaagtctcatgactctacatcagcccacaaacccactaggg
attcaagagctggtggccatgtccccagagctggacacttacgccatcaccaagaaggtc
aaggaggtgctcacagacaacaacctcggccagcgcctttttggagaaaccatcctggga
ctgactcaaggttcagtgtctgacctgctgtccaggcccaaaccttggcacaaactcagc
ctcaaaggcagggaaccgtttgtccgcatgcagctttggctcaacgatccccacaatgtc
gacaaactgagggccatgaagaagatggaaaagaaagcttatctaaaaagacggtacggg
ctgctgagtaccggctctgacagcgactcgcccagcactcgttcggagtgtgtgagtccg
gcctcggcgtctttggacttgtgtccgttcaaccaggtgaagaaaccgcgggtggtgctg
ggagctgaagagaaagaagccctgaggaaagcctacctgctggagccctatccctctcaa
aacaccatcgagatgctggcttcacagctcagtctaaaaaccaacaccgttatcaactgg
ttccacaactacaggtccaggatgcggcgggaggtcctgatggagggtctgccagacaat
gacacagacgctgaacaccacagctattccccctcagtcacaaggagcccccactctgat
ggggaggagaagaggcttcagcagcgcccaggacgcaccccttcaatctttaatccccac
agcaacgctggatcccctcatgtcaaacaggaggcagcagaaggggaagacaacagggat
ggggaagaggatggcttgatgaagctatcaagagaacagtgtttttcctcagcagtgtca
ctccctctattaaagactgagcatgagcactccattactgactgttgtgaggctaacttg
gctggccaaagcctgaagcaggaagaaggggtgagcagccagggtcaggggctctaccct
ggtgccgtgtccatggatggtcctcaaagagctaagcaggctcgacaagacggagaagaa
tctgtgaagccaactgttgatccagtcagcttcaaggcttcatcagaaccctgccggagc
agcctagaagtttccctcaactccccctctgcggcatcgtcacccggactcatgatgtcc
gtctctcctgttccttcgtcgtcggcacccatatcaccttcgctgcccaatcctccatcg
acgagcaccaaccccagccaggacacgaaccccatcccttccttccaaggccccaaactc
aacagaagcactcagagacgcaatgagaaaatggccaacctcaacaacatcatccacagg
ctggagaaagcagccaatcgagaagaaacgctggagtgggagttttaa
DBGET
integrated database retrieval system
