Oryzias melastigma (Indian medaka): 112148242
Help
Entry
112148242 CDS
T07439
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04137
Mitophagy - animal
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112148242
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112148242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112148242
03009 Ribosome biogenesis [BR:
oml03009
]
112148242
04131 Membrane trafficking [BR:
oml04131
]
112148242
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112148242
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112148242
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112148242
Membrane trafficking [BR:
oml04131
]
SNARE
SNARE associated proteins
Others
112148242
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112148242
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112148242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
112148242
NCBI-ProteinID:
XP_024130950
Ensembl:
ENSOMEG00000004412
UniProt:
A0A3B3BEN2
LinkDB
All DBs
Position
LG9:19394526..19401998
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGDPKNDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTAGG
SGPTHGTGGTGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagaccccaaaaatgatgatttatcaacagcaatcctgaaacaaaag
agcaggcccaacagactgattgttgatgagtccatcaatgaggacaacagtgtagtctct
ctgtctcaggccaaaatggatgagctgcagctcttccgtggagacacagtgctgatgaag
ggaaagaagagacgagagactgtgtgcatcgttctctccgatgacacctgttcagatgaa
aaggttcgcatgaacagggtggtgcgcaacaacctgagggttcgtctcggtgatgtcatc
agcattcagccatgtcctgatgtcaaatatgggaaaaggatccatgtccttccaattgat
gacacagtagagggaattactgggaacctgtttgaggtctacctgaagccatacttcttg
gaggcttacaggccgatccgcaaaggtgacatcttcctggtcagaggaggcatgcgtgct
gtggagtttaaggtggttgagacagatccttccccctactgtattgttgctcctgacacc
gtcattcattgtgagggtgagccaatccggagggaggatgaggaagagtctctgaacgaa
gtgggctatgatgacattggaggagtaaggaagcagttggctcagatcaaagagatggtg
gagctgcctctcagacacccggcactgtttaaggccattggagtcaagccccctcgtgga
atccttctttatggaccccctggaactggaaaaactttaattgccagggcagtggccaat
gaaactggagccttcttctttcttatcaatggtcctgagatcatgtctaagttggctgga
gagagtgagagtaacctgagaaaggcctttgaagaagctgagaaaaatgctcctgccatc
atttttattgatgagcttgatgcaattgctccaaagagagagaagactcatggcgaggtg
gagaggcgcattgtgtcacagctgctgactcttatggatggtctgaaacagcgagctcat
gtgattgtcatggctgccaccaacagacccaacagcatcgatccggctctcaggagattt
ggccgttttgacagagaagtggatattggcatccccgatgcaactggcagattggagatt
ctgcagattcacaccaagaacatgaaactggctgatgatgtggacttggaacaggttgcc
aatgagacccatggtcatgtaggagcagatctggctgctctctgctctgaggctgctctc
caggccattagaaagaagatggacctgattgacctggaggatgagaccattgatgctgaa
gtcatgaactcacttgctgttaccatggatgacttcaagtgggctctgagccagagtaac
ccatcagcactgagggagacggttgttgaagttcccaacatcacctgggatgatattgga
ggtctggaagatgttaagagagagctgcaggagttggtgcagtacccagtggagcatcca
gacaagttcctgaagtttggcatgaccccttccaaaggtgtgcttttctatggtccccct
ggttgtggtaagactctgttggccaaagcaatcgccaacgagtgccaggcaaacttcatc
tccatcaaaggacccgagctgctcaccatgtggtttggagagtctgaggccaacgtcagg
gagatctttgataaggctcgccaggccgccccctgtgttctcttctttgatgagctcgac
tccatagctaaggctcgtggtggcaatgtaggtgatggcggcggagctgctgaccgtgtg
atcaaccagatcttgactgagatggatggaatgtcgagcaagaagaatgtcttcatcatc
ggagccacaaacagaccagacatcattgaccctgccatcctgagacctggccgcctcgat
cagctcatctatatccccctgcccgatgagaagagcaggatcagcatcctgaaggccaac
ctccgcaagagccccatcagcaaggatgtggacttggacttcctggctaagatgaccaac
ggcttctctggagctgatcttacggagatctgccagcgggcgtgcaaactggccatcaga
gagagcatcgagagtgagatccgccgagagagggaaaggcagaccaacccgtccgctatg
gaagttgaagaggacgatcctgttccagaaatcaggaaagaccactttgaagaagcgatg
agattcgctcgccgttctgtcagtgacaatgatatccgcaaatacgagatgtttgctcag
actctgcagcagagccgtggatttggaagcttcaggtttccctccagtactgctggagga
agtggtccaacccatggcacaggcggaacaggaactggtcctgtgttcaatgaagataac
gatgatgatctgtatggataa
DBGET
integrated database retrieval system
