Oryzias melastigma (Indian medaka): 112148277
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Entry
112148277 CDS
T07439
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148277
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112148277
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112148277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
112148277
NCBI-ProteinID:
XP_024131009
Ensembl:
ENSOMEG00000015806
LinkDB
All DBs
Position
LG9:complement(6344463..6354927)
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AA seq
453 aa
AA seq
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MREEARDSQPAPASLLSYYSPFQARKPEQGGCVGIRRMSRHEGVSCDACLKGNFRGRRYK
CLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDLYYGGEAFSVEQPQAFTCPYC
GRMGYTEISLQEHVAAEHTETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLD
ESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSTTGGLSTSQSSSQSSNYSREAMDPIAE
LLSQLSGVRRSAGGQLSSGPSASQLQQLQMQLQLERQQAQAARQQLESARNATRGGRANA
ILTANSAPANPAPSTNHTNNPSPNPGLPEANTQHSAHNSQFLLSRLSEPRLSEAERQACE
AQWADRSLFVTELLLSTLLPDQDASASSSEDEDDCHGPLRNFADFQAMGCVEVMTLDVAL
ENLNLKESAPPTKTTKPTTKTAPTKKEPPAPPL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagaggccagggacagccagccagccccggcttctcttctctcttattattcc
ccatttcaagcccggaagcccgagcaggggggctgtgttggaattcgtaggatgtcccgt
catgaaggtgtgagttgtgacgcgtgtttaaaaggaaacttcagaggtcgacggtacaaa
tgtttaatttgctacgattacgatttgtgcgcatcgtgctacgaaagcggcgcaaccaca
accagacacaccacagagcatcccatgcagtgtatattaacacgagtcgactttgacctg
tactatggaggtgaagccttctccgtggaacagcctcaagctttcacgtgtccttactgt
ggcaggatgggctacacggagatctccctgcaggagcatgtggctgcagagcacacggag
acctccacagaagtgatctgccccatatgtgcagcgctgccaggcggcgaccccaatcat
gtgaccgatgactttgctgctcatctcacacttgaacacagagctccaagagacctggac
gagtctagcggagtgaggcacgtaaggaggatgtttcaccccgggcgtgggctggggggc
ccgcgtgcgcgcaggtccaacatgcattttaccagcagcactacgggggggctttccacc
agtcagagttcctcgcagagctccaactacagcagagaggccatggaccccatcgcagag
ctgctgtcccagttgtcgggggtgcgccgttcggcggggggccagttgagctcgggtccc
tcggcctcccagctacagcagcttcagatgcagctccagttggagcgccagcaggcgcag
gcggcacgccagcagctggagagcgcccgcaacgccacccggggaggccgagccaacgca
atcctcaccgccaactcggcccccgcaaaccccgcccccagcaccaaccacaccaacaac
cccagccccaacccgggactccccgaggccaacacgcagcattctgcacacaactcccag
tttttactcagcaggctgagcgaaccccggctgtcggaggcggagcggcaggcgtgcgag
gcgcagtgggccgaccggagcctcttcgtcacggagctgctgctgtccacgctgctgccc
gaccaggacgcctcggcctcctcctccgaggacgaggatgattgtcacggcccgttgcgg
aatttcgccgacttccaggccatgggctgcgtcgaggtcatgacgttagacgtggcgctg
gaaaaccttaacctcaaggagagcgcgcctccaaccaagacgacaaaacccaccacgaaa
acggcgcctaccaagaaagagccccccgcgccgcccctttga
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