Oryzias melastigma (Indian medaka): 112148279
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Entry
112148279 CDS
T07439
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112148279 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112148279 (zgc:65851)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112148279 (zgc:65851)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112148279 (zgc:65851)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
TolA_bind_tri
DUF1664
Motif
Other DBs
NCBI-GeneID:
112148279
NCBI-ProteinID:
XP_024131016
Ensembl:
ENSOMEG00000020571
UniProt:
A0A3B3DVI2
LinkDB
All DBs
Position
LG9:29934088..29941592
Genome browser
AA seq
537 aa
AA seq
DB search
MSFSSDVYSSSSYRRIFGDAPRSGRVGLGGSGGSSPSRLHSAGYRSGPRTYGSPSMISST
TYRRTAAPGRVFSSIPDPSMDLTQSTAVTNELKIIRTNEKEQLQGLNDRFVSFIEKVHNL
EQHNKVLEAEVALLRQRHSEPSRLHELYEQEIRELRARVEELTHEKSQMHLDCVQMNDTL
ERVREKLEEESRLREEAENALKGYRKDVDDATLARLELEKKVESLLDEIAFLRKVHEEEL
QELQASLQATQVSVEMDLSKPDLAAALKDIRAQYENLSARNQAQAEDWYRSKFATVTEAA
ARNQDAIKHSKEELSEYRRQVQARTLEIEALRGHNEALERQIAEMEERHNNEIGEMQDTI
QQLEAALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVGSAMVQSG
YPGFSYMSARTYSLGAYRKSKPDEEEEEEAEEEKEEDGEEEGEEEEGEDGGEEGEEGEEG
EEEEDQENGEGEGEGEGEEEEEEKEEEEEKPKEKEEKGKEKEKEKEKESSTGKTSKS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctccagcgacgtttacagcagcagctcctatcggaggatcttcggcgatgcc
ccgcgctccggacgcgtgggtctgggcggcagcggcgggagcagcccgtcccgcctgcac
tccgcggggtaccgcagcgggccccgcacctacggctccccctccatgatctcctccacc
acctacaggaggacggcggcccccgggcgcgtcttctcctccatcccggacccctccatg
gacctgacccagtccaccgccgtcaccaacgagctcaagatcatccgcaccaacgagaag
gagcagctccagggcctcaacgaccgcttcgtgtccttcatcgagaaagttcacaacctg
gagcagcacaacaaagtcctggaggcggaggtggcgctgctgcggcagcgccacagcgag
ccctcgcgcctgcacgagctgtacgagcaggagatccgcgagctgcgagcgcgcgtggag
gagctgacgcacgagaagagccagatgcacctggactgcgtgcagatgaacgacacgctg
gagcgggtgagggagaagctggaggaggagagcaggctgcgggaggaggcggagaacgcg
ctcaagggctaccggaaggacgtggacgacgccaccctggcgcgcctggagctggaaaag
aaagtggagtccctgctggacgagatcgccttcctcaggaaagttcatgaggaggagctg
caggaactgcaggcgtctctgcaggccacgcaggtttcagtggagatggatctgagcaaa
cccgacctggctgcagccctgaaggacatccgggcccagtatgagaacctgtctgccagg
aaccaggcccaggcagaggactggtaccgctccaagttcgccacggttactgaggctgct
gcccgcaaccaggacgccatcaagcactccaaggaggagctgagcgagtaccgccggcag
gtgcaggcccgcacgctggagatcgaagccctcaggggccacaacgaggccctggagagg
cagattgctgagatggaggagcgccacaacaatgagattggagagatgcaagacaccatt
cagcagctggaggccgcactgcgcagcaccaagggggagatgtcccgtcacctgcgggaa
tatcaggatctgttgaacgtcaagatggctctagacattgagattgctgcctacaggaag
ctgctggagggagaggaatgccgcctcagctctgtcggtagcgccatggtccagtctggc
tacccgggattctcctatatgtcagcccgcacctacagcctgggagcttacaggaagtcc
aagccggatgaagaggaggaagaggaggcagaggaggagaaggaggaagatggagaagaa
gaaggagaggaggaggaaggtgaagatggaggagaggaaggagaggagggagaggaggga
gaggaagaggaagaccaggagaatggcgagggcgagggtgaaggtgagggagaggaagaa
gaggaggaaaaagaggaggaagaggaaaagccaaaggaaaaagaggagaagggaaaggaa
aaggagaaggagaaagagaaggagagctccactgggaagaccagcaagagctaa
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