Oryzias melastigma (Indian medaka): 112148280
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Entry
112148280 CDS
T07439
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112148280 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112148280 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oml04030
]
112148280 (ptafr)
G protein-coupled receptors [BR:
oml04030
]
Rhodopsin family
Others
Platelet activating factor
112148280 (ptafr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
CitMHS
GP4
Bac_export_2
Serpentine_r_xa
Motif
Other DBs
NCBI-GeneID:
112148280
NCBI-ProteinID:
XP_024131062
Ensembl:
ENSOMEG00000015205
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Position
LG22:complement(7274393..7280966)
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AA seq
391 aa
AA seq
DB search
MLGTTQQVVTEPPTANTSSFLDSDFRYTLFSVTYSIFFVVGFFANVYVLFILRCLRDAKG
MGEIRIYMTNLTIADLLFVCALPFWIGYYYRGGHWIYKDFLCRLTGSFFFINTYGTILFL
GAISLNRYWAVTRPLNVAASNRRRRGIIVCVLIWLCTVSMAIPQLTSEGTHTGSDNLTRC
FEGYHEETDTEKRKVAFTHFLIIGLFFVVFFLVVVCNLLIALALLSQKAPQSTLRSQTLV
HKNSNRTMSSSRKKPRGVKQRALQMLLAVVGVFVLCFLPHHVIQAPWVLAVLKISEGWGH
VDWDQGTRQTLNDAHQITLVLMGLNCILDPVVYYFATRKFRRFIMAHMKKFVKGDGCANT
LNTQMSVESKNHSQRLQSVQQEPNEAQPDQS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaccactcaacaagttgtgacggaaccccctacggccaacacttcctcattc
ctggactcagactttcgctacacgctgttctccgtcacttacagcatcttcttcgtggtg
ggcttcttcgctaatgtgtacgtgctgttcatcctgcgatgcctgcgtgatgcaaagggc
atgggagagatccgcatctacatgaccaacctgaccatcgcggatctacttttcgtgtgc
gcccttcccttttggattggttactactaccgcggaggccactggatctacaaagacttt
ctgtgtcggctgacgggctcgttcttttttattaacacctacggcaccatcctcttcctg
ggagccatcagtctgaacagatactgggcggtgacgcggccgctgaatgtggcggcttcg
aatcgcaggcgccgcgggatcatcgtgtgcgttctgatctggttgtgcacggtgtccatg
gccatcccgcagctgacgtcggaggggacgcacactggctcagacaacctgacgcgatgt
tttgagggctaccacgaggaaacggacacagagaagcgaaaggtcgccttcactcatttt
ttaatcatcgggctgtttttcgttgttttcttccttgtcgtggtgtgtaacctcctcatc
gctctggccctactctctcaaaaggctcctcaatcaacgttgcgatcccaaacattagtt
cacaaaaattccaacaggaccatgtcgtcctcgaggaaaaagccaagaggggtgaaacaa
cgagccttgcagatgctgctggcagtggtgggtgtgtttgttctgtgtttcctgcctcac
catgtaatccaagccccctgggttctggcggtactgaagatctcagaaggatggggccac
gtagactgggaccaaggcacccgccaaactctaaacgacgcccatcagatcaccctggtt
ctaatgggcctcaactgcattttggatcctgtggtttattactttgccacaaggaagttc
aggaggttcatcatggcgcacatgaagaagttcgtgaaaggagatggttgtgccaacaca
ctcaacacccagatgtctgtggagagcaaaaatcacagccaaagactgcagagcgttcaa
caggagcccaacgaggcgcaacccgaccaatcgtga
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