Oryzias melastigma (Indian medaka): 112148292
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Entry
112148292 CDS
T07439
Symbol
sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
oml
Oryzias melastigma (Indian medaka)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
112148292
NCBI-ProteinID:
XP_024131040
Ensembl:
ENSOMEG00000019695
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Position
LG9:complement(8279441..8402171)
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AA seq
1024 aa
AA seq
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MRSEALLVYFTLLQIAGAGFPEDSEPISISHGNYTKQYPAFVGHKPGRNNTQRHKLDIQL
ILIMNRTLYVAARDHIYTVDTDTAHSDEIFFNKKMTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNEDTLFVCGTNAFNPSCRTYKTDTLDAVGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFFREIA
MEYNTMGKVVFPRVARVCKNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQAVT
DVIHVNGRDVVLATFSTPYNSIPGSAVCAYDMAEVAKTFTGRFKEQKSPDSTWTPFPEEK
VPKPRPGSCAGSPSMERYKISNEFPDDTLNFIKMHPLMDEAVPSIANRPWFLKTMVRYRL
TRIVVDNEAGPHRNNTVVFLGSEKGIILKFLAKMNNGFLNNSLFLEEVNVYNPDKCSIDG
VEDKRIIGMQIDGKNHAMWVAFTSCVVKVPLSRCERHGRCKKSCIASRDPYCGWVSEGAC
RQVVGKTKLAFEQDVEHGNTDGLGDCQNTFVALNDIPSGYEGHHHHHHHHSLSIPTPALP
KAAEGPLGRGRMVERKDPPMSSDKGEDPYLAVPSQTQSEANGVIRESYQKGRDQLVPVTL
LAIAVILAFAMGAFFSGLIVYCVCDHRRRDIDLAGRKEKDSLHLHSRRGSMNSVTKLTGL
FEMQGKEGRPEAILTPLIHNGRLTPNGKMLIKAEQHHLDFAALPTPESTPMQPRRKTSRG
SREWERNQNIINACTKDMPSMGSPVISTDLPLRASPGHIPSVVVLPLPQHQHQLQPHLQQ
SYQHEYVEQPHHSDLSVAHSIMDDQGATLEYKTVKNPCHNLNVVDPDGMLPPRVPQREAS
LTIPPAVPQMGKRLEVHSSVYGLRKGSASAACGSSGLKKHNTNSSNSSHLARHHSFRVET
PPPAPQRVDSIQMTAQGVSLSRQPGMSTYGSLPRTGVKHLRPDVPPKPSLVSLSTKVKSS
ESGT
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggaggccttgttagtctacttcacgctactgcaaatagccggggcgggtttc
cccgaggacagcgagcctataagcatctcacacggcaactatacaaaacagtatccagca
tttgtgggccataaacctggaagaaacaacacgcagaggcacaaactggacatccagctc
atcctgatcatgaacaggacgttatatgttgctgccagggatcacatatacacggtggac
acggacactgcccacagtgacgagatctttttcaataagaaaatgacctggaagtccaga
caggcagatgtggacacctgcagaatgaaagggaaacataaggatgagtgtcacaacttc
atcaaagtcctcctgcagcaaaatgaagacaccttatttgtgtgtggaacgaacgctttc
aacccctcctgtcggacctacaagaccgacaccctggatgccgtgggagaagaaatcagt
gggatggcacgctgtccttacgatgccaagcacgccaatgtggccctctttgctgatggc
aagctgtactcagccactgtaacagactttctagcgatcgatgcagtcatctaccgtagc
cttggcgacagtccgactctgcgcactgtcaaacatgactccaaatggctcaaagagccc
tactttgttcaggcagttgattacggggacttcatctatttcttctttcgggaaattgct
atggagtacaatacaatgggaaaggtggtgtttcctcgggttgcgagggtttgtaagaac
gaccgcggcggctcgcctcgcgtcctggagaagcagtggacatcctttctgaagtctcgc
ctgaactgctccatccccggcgactcccacttctactttaacatcctgcaggccgtgacg
gacgtcattcatgtcaatgggagggatgttgtgctggcgactttctccacaccttacaac
agcattcccggctcggcagtgtgtgcttatgacatggctgaagtggccaagacgtttacg
ggacgtttcaaagagcagaaatccccggactccacttggacaccttttcctgaggagaag
gttcccaaaccaagacctggcagctgtgctggtagtccgtccatggagaggtataagata
tctaatgagttccccgacgacacactcaacttcatcaagatgcatcctctgatggacgag
gccgtgccttccatcgccaacaggccctggtttctcaagactatggttcggtatcgcttg
acacgcattgtggtggacaacgaagcaggtccccatagaaacaacaccgtggtattcctg
ggatccgaaaaaggcatcatcctcaaattcctggccaagatgaacaacggcttcctgaat
aacagcctgtttctagaggaggtcaacgtctacaaccctgacaagtgcagcatagatgga
gtagaggacaagcgcatcattggcatgcagattgatggcaagaaccatgccatgtgggta
gctttcacctcgtgtgtggttaaagtaccgctgtctcggtgcgaacgacatggacgctgc
aagaagtcctgcattgcctccagagatccttattgcggttgggtgtcagagggggcctgc
agacaggtggttggcaagaccaaattagcctttgagcaggacgtggagcatggtaacaca
gatggtctgggagactgccaaaatacctttgtggctctgaatgatattccatctggttat
gaaggccaccatcaccaccatcatcaccactccctctcaattcccaccccggcccttccc
aaggctgctgagggcccgctagggcggggccgcatggtggagcggaaggatccccccatg
agctcagacaaaggggaggacccctacttggccgtgccctctcagactcaatccgaagcc
aatggcgtgatccgcgagagctaccagaagggtcgtgaccagctggttcccgtgaccctg
ctggccatagctgtcatcctggcatttgccatgggcgccttcttctcaggcctaattgtc
tactgcgtctgcgaccaccggcggcgagacattgacctggcaggccgcaaggaaaaggac
agcctgcacctgcactcccgacgaggatcaatgaacagcgtgaccaagcttactggcctg
tttgagatgcagggcaaagagggtcgcccagaggcaatcctcacccctctgatacacaac
gggcggctgacgccaaatgggaagatgctgataaaagcggagcagcaccacctggacttt
gctgctctgccaacacctgaatccacgcccatgcagccacgccgcaagaccagccgggga
agtcgtgagtgggaaagaaatcagaatatcatcaacgcttgcaccaaggacatgccttcc
atgggctctccagtcatctccacagacttgcccctgagagcatcgccgggacacatcccc
agtgtggtagtgctgccccttccgcagcatcagcaccagcttcagcctcatctgcagcag
tcctaccagcatgaatatgtggagcagcctcatcacagtgatctaagcgtggcccacagc
attatggatgaccagggagccactcttgagtacaagacagtaaagaatccgtgtcacaac
ctaaacgttgtggatccagatgggatgctgccccctcgtgtgccgcagcgagaagcttct
ctcaccatcccccctgctgttccacagatgggcaaacgcttggaggtccactcatcagtc
tacggcctccggaaaggatccgcatctgctgcttgcgggtcctctggcctcaagaagcat
aacaccaactcatctaattcctcccacttggctagacatcacagcttccgtgtggaaacc
ccaccacctgcaccccagagggtggactcaatacaaatgacagcacagggcgtgtcgctg
tcacggcagcctggaatgagcacctatggctcactgccccgaacaggtgtcaagcacctc
aggcctgacgtccctcctaaaccctctctagtctcactctcaacaaaagtcaagtccagt
gaatccggcacatag
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