Oryzias melastigma (Indian medaka): 112148320
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Entry
112148320 CDS
T07439
Symbol
rnf165b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148320 (rnf165b)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112148320 (rnf165b)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112148320 (rnf165b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
Prok-RING_4
RINGv
zf-RING_4
zf-Nse
zf-RING-like
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112148320
NCBI-ProteinID:
XP_024131114
Ensembl:
ENSOMEG00000020471
LinkDB
All DBs
Position
LG9:8699496..8714356
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AA seq
355 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSHFNRQQQQQQHSHATSCRHFQLGPQAPLPMDFPMPHPG
QPQSGINPHLAPPGHQHISSLHPPLNPLPAPQFQDIPTPPFLPQALHQQYLLQQQILEAQ
HRHILPPSSRRTPERVPHQPHRLRPGYEFAPPLHVPQPVVQQPRYLAEGTDWDLSVDAGL
APHQYHIHPLPQHYQHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLALQSLNPSR
HASAVRESYEELLQLEDRLGSVNRGAIQSTIERFTFPHKYKKRIPQDLKMCLDDEELDTD
EKCTICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIETQLTPDS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtgcatgtcggatacctggttctccccgtattcggctcagtaagaaacaga
ggatcccattttaaccggcaacagcaacaacagcagcacagccatgctacctcttgccgg
cacttccagctaggtcctcaggccccactgcccatggacttccccatgccccacccaggg
cagccacagtcaggcataaacccccacctggccccacctggccaccagcatatctcttca
cttcatccgcccctcaaccccctgcctgctcctcagttccaggacatccccacccctccc
ttcctacctcaggcattacaccagcaatacctcctccagcagcagatcctggaggcccag
catcggcacatcctgccgccgtccagtagacgcaccccagagagagtcccccaccaaccc
cacagactacggccaggatacgagtttgcgcccccgcttcacgtccctcagcctgtggtg
cagcagccgcgatacctagctgagggcacggactgggatctgagtgttgatgctgggctg
gctccacatcagtatcatatccacccactgccgcagcactatcagcactacttgacctcc
cccaggatgcaccacttccccagaaacaatgcctcaacgcaagtggttgtccatgagatc
agaaactacccctacccccagttgcatttgctggctctgcagagtctcaacccctcccgc
cacgcatctgccgttagagaaagctacgaggagctcctgcagctggaggacaggctgggc
agcgtaaaccgcggagcaattcaatccaccatagagagattcacttttccacacaagtat
aaaaagagaataccccaggacctgaagatgtgcctggatgatgaggagctggatactgat
gaaaaatgcaccatttgtctttcgatgctggaagatggagaggacgtcaggagattaccc
tgcatgcacctcttccaccaggcgtgcgttgaccagtggctggccaccagcaggaagtgc
cccatctgcagagtggacattgagacccagctgacccccgacagctga
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