Oryzias melastigma (Indian medaka): 112148321
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Entry
112148321 CDS
T07439
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148321 (trim36)
04121 Ubiquitin system [BR:
oml04121
]
112148321 (trim36)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112148321 (trim36)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112148321 (trim36)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112148321 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
SPRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Pur_ac_phosph_N
zf-C3HC4_3
RING_XB3-XBAT31
fn3
zf-RING_5
zf-RING_2
DUF1826
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
112148321
NCBI-ProteinID:
XP_024131119
Ensembl:
ENSOMEG00000023192
UniProt:
A0A3B3CUN7
LinkDB
All DBs
Position
LG9:complement(14662960..14691907)
Genome browser
AA seq
751 aa
AA seq
DB search
MSDSEDMTEFASIVERIERGEVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVREL
LMLNHDDSFDAGSESSLPGSPRSRVPSPSMERLDRLVRSGGSRGSISSPGWRRGSVTPRV
TTIPCPGCQHDIDLGERGISMLFRNFTLESIVERYRQAARAAVAIMCNICKPPNLQEATK
SCMDCKASYCNECFKLHHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMYCEVCKR
PVCHLCKLGGSHANHKVTSMSSAYKILKEKLAKSIHYLISKEDQVRTQITELELLISQTE
ENGQLAERQANEHFERLLETLQERRSEMLRSIEQSRNRRMEQLKSQVEEYQGMLENSGLV
GYAQEVLKETDQSCFVQTAKQLHVRIQKATDSLRTFHPAADTCFDEFVLDTSREETLLKE
MCFGGVPDPPLIDLSQSKVYNEASISWRLADDHLPTDHHVLEYRRLIGPSQSPSQEDGED
GGFWRATDRVYGSNTLVHDLEPDTLYSFRVRSCRNSMFSPYSPEVTFHTPPAPVFGFLFS
DKCGFSTERLVLNKRRDAVESVAGTAFLLAAERVQTGSYISLDYIIGDTGISQGRHYWAF
KVDPHSYMVKVGVASDTKIIEWFHNPRDTSSPRYDHDSGHDSGSEDASYEVSQPFILLTL
GMGKLFIPKASSSTANPPAGDPGNRVLPMPQRLGVCLDYDSSRVFFYDADTMRCIYERQV
DCSGTMFPAFGLMGSGKVQLEEFIAAKRLTF
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactccgaggacatgacggagttcgccagcatcgtggagcggatcgagcggggc
gaggtccccatcaagaacatcgagagggagctgatctgccccatctgtaaggagctcttc
acccacccgctgatcctgccctgccagcacagcgtctgccacaaatgtgtgcgggagctg
ctgatgctgaaccacgacgactccttcgacgctggttccgagtcctccctgcccggcagc
cccaggtccagggtgccgtccccctccatggagaggctggacaggctcgtgagatcaggt
gggtctcggggttccatctcctccccgggctggcgaagaggttccgtcactccccgggtc
accaccatcccatgcccgggctgccagcacgacatcgacctcggcgaacgcggcatcagc
atgctgttccgtaacttcaccctggagagcatcgtcgagcgctaccggcaagctgcccgc
gcagctgtggcgatcatgtgcaacatctgcaaacctcccaatctgcaggaggcgacgaag
agctgcatggactgcaaggccagctactgtaatgagtgcttcaagctgcaccacccgtgg
ggtactcctaaagcccagcatgagtatgttggccccaccacgaattttagacccaaggtg
ctcatgtgcccagagcacgagatggagaaggtgaacatgtactgtgaagtctgcaaacgg
ccagtgtgtcacctatgcaagctgggaggatcccacgccaaccacaaagtcacttccatg
agcagtgcctacaagatcctcaaggagaaactggccaagagtatccattacctcatcagc
aaagaggatcaggtcaggactcagattactgagctggagcttctcatcagtcagactgag
gaaaatggtcagctggcagagcgtcaggccaacgagcactttgagcgtctgttggagact
cttcaagaaagaagatctgagatgctgcgatccattgagcagtctcggaaccggcggatg
gaacagttgaagtcccaggtggaggagtaccagggcatgctggagaacagtggtctggtg
ggttacgcgcaggaggtgttgaaggagacggatcagtcctgcttcgtacaaactgcaaag
cagctccatgtcaggatccagaaagccacagactctctgaggacgttccaccctgcagcg
gacacctgctttgatgagtttgtgctggacacatctagagaagaaactctcctcaaggag
atgtgctttggaggagttccagacccccctctgatcgacttgtcccaaagcaaagtttat
aatgaggcctcgatcagctggaggctggcagacgaccatctacctacagatcaccatgtg
ctcgagtatcgcagacttataggcccgagccaatccccatctcaggaggatggagaagac
ggtgggttctggagggccacggacagggtgtatggaagcaacaccctagtgcatgacctg
gagccggacaccctgtactccttcagagttcgaagctgcagaaactccatgttcagtcct
tacagtcctgaggtcactttccacacaccacctgctcctgtttttgggttcctgttcagt
gataaatgtgggttcagcaccgaaaggctggttcttaacaaaagacgagacgcagtggag
agtgtggccggcacggctttcctccttgcagctgaacgcgtgcagacgggcagctacatc
agcctggactacatcattggagatacgggcatttctcaaggaagacactattgggcattt
aaggtggatccacactcctacatggttaaagtgggagtggcttcagatacaaagatcatt
gaatggttccacaatccaagagacaccagcagcccaaggtatgaccatgacagcggacat
gacagcggcagcgaggacgcgtcctacgaagtctcccaacccttcatcctcctcactctc
ggcatgggcaaactcttcatccccaaggcctcttcctccaccgccaacccgccggccggc
gatcccggcaaccgcgtgcttcccatgccccagcgcctgggcgtgtgcctggattacgac
tccagccgagtcttcttctacgacgccgacaccatgaggtgcatttacgagaggcaggtg
gactgttcgggaacgatgtttccggctttcggcctcatgggcagcgggaaggttcagctg
gaggagttcatcgcggcgaagaggctgactttctga
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integrated database retrieval system
