Oryzias melastigma (Indian medaka): 112148336
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Entry
112148336 CDS
T07439
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148336 (hip1rb)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112148336 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
112148336
NCBI-ProteinID:
XP_024131155
Ensembl:
ENSOMEG00000001634
LinkDB
All DBs
Position
LG9:18037060..18054517
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AA seq
1065 aa
AA seq
DB search
MNRSTRVKTRRTEANLGAERDHFEKQQLSSMGKAINSSEMPVKEKHARRIILGTHREKGA
HTFWSYALGFPLNDNSILCWKFCHVLHKVLRDGHRNVLQDCMRHHGSLVEVGKLWSQLHD
RYGQLVALYTKLLCTKLEFHVKHSKIPPNLEVTDEVLERTAGTDISDVFQLTVEVFDYMD
AELRLADTVIRQLNTSIAVSSLTSGQCRLAPLIQVIQDCSQLYHFNVKLLFKLHACLPAD
TLQGHRDRFHEQFRSLKSFFNKTRDMIYFKRLIQIPKLPDSPPNFLHAAALAKHVKPVVV
IPADEDGEPQDDDDDDPEPLIDVSDSPASIVQAQPQVDIFDQTFGPPNGGFDDRDLQIDS
LKTELDYVKTELEKVKSEAQRYVTQLKSQINSLEAELEEQRVQKQRALVENEQLRMELET
TLRRNIEHESVQVSYIEAEKRAQATEQRYNKLKEKHTELVSSHAELLRKSADTVKMLSAT
QQTQEEVERTKHQLSFEIERIKQESEMKLEEQKFEMERVKRELEEKMMEVTRMKATLQNT
QKSSEQITSSMTALQAEKERLMRSVSEKEAELSTVRQTAQVQQSSLQLERDKSSRELVEL
QGKLKEKASQEEKMKQKLLDEQFALLQGTITEAENIIQDAVTKLDDPLHIRCTSSPDYLI
NRAEATLGSIDKMKKGHADYLKNMADAGGLLRSLTQFSHLAADTIVNGSATAHQAPTDQA
DRLTSNCRGCATQSLQFLKDLKSKASLQRADPASVRDIVQKILKLGQELRPKGMDIRQEE
LGDLVDKEMAATSAAIEEAVRRIDEMMKQAQKDTSGVKLEVNERILNNCTGLMKAIRMLV
KASTDLQKEIVESGRGAATIKEFYARNSRWTEGLISAAKAVGWGATEMVESADKVVLHTG
KYEELIVCSHEIAASTAQLVAASKVKADRHSRKLPVLQQASRHVNEMAANLVASTKSGRE
HLEDKDPMDFSGMSLIKLRKEEMESQVKVLELETMLENERQRLGDLRKKHYDLAGVPVEQ
VPEGNGELLSLDNPVTMSPKPSKPALMKKPPLSQKPNLAPKVVFK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggtccacacgagtgaaaaccaggcggaccgaggccaacctcggagcagagagg
gatcatttcgagaaacagcagcttagcagcatgggcaaagccatcaacagctcagaaatg
cctgtgaaggaaaagcatgcacgacgaatcatccttgggacgcacagggagaaaggagcc
cacactttctggtcttatgctctgggttttcccctcaatgacaactccatcctttgctgg
aagttctgccatgtgctgcacaaagtcctgcgtgatggacatcgcaacgttctacaagac
tgcatgagacatcatggctctttagttgaagttggaaaactatggagtcaactccatgac
agatatggacagttggttgctctatataccaagctgctttgcacaaaactagagttccat
gtaaagcattcaaagatcccaccaaacctagaagtcacagatgaagttctggagcgcact
gcaggaacagacatcagtgatgtgttccagctcaccgtggaggtgtttgattacatggat
gcagagctgcggctggcagacacagttatccgacagctgaacacatccatcgccgtctcc
agtctcacatcaggccagtgtcgcctggctccccttatccaggttatccaggactgcagc
caactttaccacttcaacgtcaagctgcttttcaagctgcatgcctgtctccctgcggat
actttacaaggtcaccgtgaccgtttccatgaacagttccgtagcctgaagagctttttc
aataaaaccagagacatgatttatttcaagaggctgatccagattcccaagctgcctgac
tctcctcctaacttccttcatgcagctgcgctggccaagcacgtaaagcctgtggtggtc
atccctgctgatgaggatggagagccgcaagacgatgatgacgatgacccagagccgctc
atcgacgtcagcgattctccagcttccatcgtccaggcacagccacaggtggacatattc
gatcagacttttggacctcccaatggaggctttgatgacagggatctccagattgatagt
ctgaagactgagctggactacgtaaaaacggagctggagaaggtcaagtcagaggcccag
agatacgtcacccagcttaaatcccagatcaacagtttagaggcggagctggaggagcag
cgtgtgcagaaacaacgcgcccttgtggaaaacgaacagctgcgcatggagttggagacg
accctgcgccgtaacatagagcacgagagcgtgcaggtctcctacatcgaggcagaaaaa
agggcacaggccactgagcagcggtacaacaagttaaaggagaagcacacagaactggtg
tccagccatgctgagctactccgaaagagtgcagacactgtgaagatgctgtcagcaaca
cagcagacccaggaggaagtggagaggaccaaacaccagctgtccttcgaaatcgagcgg
ataaagcaggaatctgaaatgaagctggaagaacagaagtttgagatggagagagtgaaa
agagagctggaggagaagatgatggaggttacacgcatgaaggccacgctgcaaaacact
cagaagtcgtcggagcagatcaccagttcaatgacagctctgcaggcagagaaagagcgt
ttgatgcgatctgtgagcgagaaggaggcagagctgtcgactgtgcggcaaacggcgcag
gtgcagcagtcctcacttcagctggagcgagacaagagcagcagggagctggtggagctg
cagggaaaactgaaggagaaggcaagtcaggaggagaaaatgaagcagaagcttttggat
gagcagtttgctctgctgcaaggaactataacagaagctgagaacatcattcaagatgct
gtcaccaagctggacgatccactccacatacgctgcaccagctccccagattacctcata
aatcgggcagaagctacgcttggctccattgacaaaatgaaaaaaggtcatgcagattat
ctaaagaacatggcggatgctggaggcctgctgaggtctctgacccagttctcccacttg
gctgcagacactattgttaacggcagtgccactgctcaccaagccccgactgaccaagcg
gatcgactgacgtcaaactgcagaggctgtgccacacagagtttgcagttcctgaaggac
ctgaagtccaaagcttctctccagagagcagatcctgcctctgttcgtgacattgtacaa
aagatccttaagttaggccaggagctgcggcctaaaggaatggatatccgtcaagaggag
ctgggagatctggtggataaagaaatggcagcgacatcagcagcgattgaggaggcagtg
cgaaggattgatgaaatgatgaaacaggcacaaaaagacacatctggagttaaactggag
gtcaacgaaagaattctcaacaactgcactggtctaatgaaggctattcgcatgctggtc
aaagcatccacagatttacaaaaggagattgtggagagtgggaggggtgcagccaccatt
aaggagttttatgcgagaaactcccgttggactgagggactcatatctgctgccaaagct
gtgggatggggagctacagagatggtcgagtctgcggacaaggtggtgctgcacacagga
aaatacgaggagttgatcgtctgttctcatgagattgctgcaagcaccgcacagcttgtt
gctgcttcaaaggtaaaagctgatcgccacagtcggaagctgccggttcttcagcaggcc
tctcgccatgtaaatgagatggcagccaatctggtggcctcaacaaagtctggtcgagag
cacctggaggacaaagatcccatggacttttctgggatgtcccttattaagctaagaaaa
gaagaaatggagtcacaggtgaaagtgctcgagttggaaacgatgttggagaatgaacgc
cagcgtttaggtgacctgagaaagaagcactatgacctggctggagtgcctgtagagcag
gttcctgaaggcaacggtgaacttttatcgctggacaaccctgttactatgtcaccaaag
ccgtctaagcccgcactgatgaagaagcctccgctgtcccagaaacccaacctcgccccc
aaagttgtgtttaaataa
DBGET
integrated database retrieval system
