Oryzias melastigma (Indian medaka): 112148462
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Entry
112148462 CDS
T07439
Symbol
kntc1
Name
(RefSeq) kinetochore-associated protein 1
KO
K11577
kinetochore-associated protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112148462 (kntc1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
112148462 (kntc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rod_C
KNTC1_N
ARM_KNTC1_3rd
ARM_KNTC1_1st
ARM_KNTC1_2nd
Motif
Other DBs
NCBI-GeneID:
112148462
NCBI-ProteinID:
XP_024131370
LinkDB
All DBs
Position
LG9:18013648..18033792
Genome browser
AA seq
2207 aa
AA seq
DB search
MWSDVELLINEDTNIVRYDGVSREDSGSGLYQVDTLVRISSSNKTQTDPRLSSSSGPNWS
IIVVDNTVILFDQSYQTILLLLHFDTDVDTIDVCLERKFLVVCERNGNLHLIYVPHKKIL
LTRALVEKPSSGDKKTYRYLIINEDKSSSGTYHVFLLIKNGFFHITNLSLAKIEAAIERM
DVEALKEIQSLIKINFCSTEDYHDEGCSTAVMFNLGHEIHLMIGGGKEHVLTHWKMDPLQ
GRMCFSQSVNSSLIPGVRRMEVVENLLYILDTEDVLSVWDLHILVLVHSWPDLAIQDFEL
TSECGQDKGGMRMITLTKKDSSQISSLQIRNLPSMTVCYSLDVSSVSCLVQTKTNVDSIF
VVEGIYEDQENRAEPVAAVVVKCFTEALPENRLSRLLHKHMFEEAEKFAIAFQLDLELVY
KVKLDFVLEQLDSASVHGSGQDVWSKLVDEAKTNLMKITDEQYVVDYCLKAPWPTIETTE
KMLNHAATRYSSLQIQEALARLATFCCLHGLENFNGNAWIEFLHSTDHLRNILTHLREGD
MKGAQLLWLRYEGQITLDFDETNLEALLSAIPEDLSSQDLSPWLRTVLVPFVRKVLPRGQ
KILAKWLEQKARNLELTEKGSWPQNGLDLAVLGLPSLWTWKKSLDEDYGSDEVENLRSLV
SNLRQLLDLHQKYSCKLSLSVLEKGTVWSVVFYMLDKVPAPELIAATVENSVLPYALEHQ
LPFDELLLRYIKDLLERCSSQTTTLFTEWEAKAVAVLGCMNDSDLKVDAVLEIMQKAVVP
WSNVVEKLVQQYLEMDGPKQELLKESYRLMEIRKLLRGYGIRNFNLSNSTQVMTLIRYIL
KQDLPMSLDDSLTLADAYKLPTSQINYLYLIQLIGQHKTEEVLSVLKRLSSPEAECVIEH
LTSWAQLQLEDKAHISDEHKKHQMVVAQVMVEALKYLHVIQKQDALKCMECENNLIMFKA
ISHLQEDFDVFFTPTNFEDPKIRKQIQERHITAYENTRSRHSSKQKTVTTPVVANDPDGK
TKTISTEAGLRRLGRQLQRTEQELWSDLGLRALKVGKVDKALKIFSELYEHHCNSSTGKV
LFTAARMLCQMLEADVPMVIPKDMDLPAVIHDLACQAISVCHSDLLLDCLELCKGTRTAM
DVYQQCQLSDNYGFIAKDFSVEAGKDHHSQWTFQDVFSEDCIVLDPLSVLPVQYEITNCL
LPLSQDAKLYPLDCSCLSHCSFADGSNYLRVLLGPLSNMLQMLQECSQLELALRVLVNSY
GSCLQHVTSNIMDINLSVQLYDPQDLKKYSLCLNNFQKTTTSTLNSVAVALLNKVFNWRV
VDCDLAIGLCTLLTRAEVFKTLWKVIDNTWQNYDKILAVAKIGANLSCLYKEPEELKKFL
SVITDAEWGIKLGKLEISIQPVFRQQPEMKSNLIPVLVKNKKITPDVILQYCSTFGLDRD
HVINQYITTLLLLQEDEDNMEALASGLEEEVQSLCHADALERVLQIIPMLHSTSELTGNL
CAAMFKLSPYNYERIEVVLKIIQAADENVATFSVSQAMGLLQHLKSYKRVSPPADVENTH
LLENGLLPNPLSNSRLPFHLLLQSKHYWKIISPELSEETFPTLLLISKLMKVSLDKLYMS
AANHVFEKKIKPLLLEKKKMGHSYAYNEQTFKVAKTMMMYIQCIQSPEWAAATAHKITQE
LPPGYEKTQSLRFCLVLGDAWLRDPNLEEAARARGETFLSKLKLQFQRSATENVLMTSQL
SNPENLKLTGLPGRLVVALYEHNSVEQRYKETGVQNYPDIHAAVKEISTINNVDLKKIRN
MLLEKWICKTGPAMTREMGIQDCVTNIDEDPDLMRVVYMLQSFSMEDAFHILSPILSAET
WPFSTSGPRLTFCHRTRALLCLVRLVDAAMLEAQLQIPRTKLLNYLKCYIFVSQLEALNI
PYTVQSFLNSPKEGLVKGLWKNHSHEPQAVRLVADLCLEYQVYDPQLWNSLLQKLLGFNL
ISHLQKVLEAIVSVPALWEIPSFCRTWRSIILAPFVSASVPLSPEQQATLYRTFVLLLKC
PFLLNLDLIGIANRFAQFNLPAFALGTLLLIPCASKKEQQIQGFLSLCNPVTVLEQVEEL
MNTGELAGIPSQIRETVLTFISQNGQHQKLMKTKHFDHLKKLIFSRGQTEQVKDLVDYLT
SQNCEDDADLLAHEYSKHRENQQGRSLKSEINGCMKEYLHLQNGVSG
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgacgttgagctgttgataaacgaggacacaaacatcgtccgttatgacggt
gtgtcaagggaggacagtggtagcggcttgtaccaagtggacacactcgtcagaatctca
tcctctaataagacacagacagacccccggctctcatcttcaagtggtccaaattggagt
atcattgttgttgacaacacagtgatcctgtttgatcagagctaccagacgatccttttg
cttctccactttgatacggatgtggataccattgatgtttgtctggaaagaaagtttttg
gtggtctgtgaaagaaatggaaatcttcatttaatatatgttccacacaagaaaatcctc
ctcactagagcattggttgagaaaccatccagtggagataagaaaacctaccgctatctc
atcataaatgaggacaagtcatcctcagggacataccatgtgtttcttcttattaagaat
ggctttttccacatcacaaatctttcactggcaaagattgaagcagctattgaaagaatg
gatgttgaagctctgaaagagatccagagtctcataaagataaacttttgctcaactgag
gattatcatgatgaaggttgcagcacggcagtgatgttcaatttaggtcatgaaattcac
ctaatgattgggggaggtaaagaacatgtcttgactcattggaagatggatcctcttcag
ggcaggatgtgcttttcccagtcagtaaacagcagcttaatcccaggcgtgaggaggatg
gaggtggtagaaaatctcctttacattctcgacactgaggacgtcttgagtgtttgggat
ctgcacatccttgttctggttcatagttggccagatctggcgattcaagacttcgaactg
acatcagagtgtggccaagacaagggtggcatgaggatgattacactgacaaagaaagac
agcagtcagatcagctcactgcagataagaaatctgccctctatgactgtttgctactct
ctggatgtctcttcagtctcttgtcttgttcaaacaaaaacaaacgtggactccattttt
gtggttgaagggatttatgaggaccaagaaaatcgggcagagccagtagctgccgtcgtt
gttaaatgtttcacagaggctttgccagagaacagacttagccgactccttcacaaacac
atgtttgaagaggctgagaagttcgccatcgcatttcagctggatttagagcttgtctat
aaggtgaagcttgactttgtgctggagcagctggactcagcatcagtgcacggctctgga
caggatgtgtggtctaagcttgtcgatgaggccaaaaccaacctgatgaaaatcacagat
gagcagtacgtggtcgactattgtctcaaggctccttggccgaccatcgaaaccacagaa
aagatgttaaaccacgctgctacccgatattcctccctacaaatccaggaggcccttgcc
aggctggcaaccttttgctgcctgcatggcttggaaaacttcaatggcaatgcttggatt
gagtttctgcatagcactgaccatctcaggaacattctgacacatctgagagagggagac
atgaagggggcacagctgctttggctcagatatgagggccagatcactttggactttgat
gagacaaatcttgaagcccttctctctgccatcccagaggacctgtcatctcaagacctc
agtccatggttaaggactgttttggttccttttgtgaggaaagtcctccctagaggacag
aaaattctagcaaaatggcttgagcagaaggcaagaaacctggagctgactgaaaagggt
tcttggccacaaaacggactggatttggccgttcttggattaccctctttgtggacgtgg
aagaaatctcttgatgaagattatggttcggatgaggtggagaacctcagatccctggtg
tccaacctccgccagctgctggaccttcaccagaaatacagctgcaaactttcactgtcg
gtcctggagaaggggactgtttggagtgttgtgttctacatgctcgacaaagttcccgct
ccagaactgatagcagccaccgtggaaaacagcgttctgccgtacgctttagaacaccaa
cttccttttgatgagcttctgctacgatatatcaaggatcttctggagcgctgcagttct
cagacgacaacgcttttcacagaatgggaagcaaaagccgtggctgttctcggctgcatg
aatgactctgatctgaaggtggatgctgtgctggagatcatgcagaaagctgtggttccc
tggagtaatgtggtggagaaacttgttcagcagtacttggagatggatggaccaaaacaa
gagcttttaaaagagagctacaggctgatggagataaggaaacttctcaggggttatggc
attcgcaacttcaatctctctaactctactcaagtcatgacgctgataagatacatcctg
aagcaagacttaccgatgtctctggacgactccctgactttagctgacgcttacaaacta
ccaacatcacagataaattacctttatctcatccaactgataggccaacacaagactgag
gaggttttgagtgtcttaaagcgattgtcatctccagaggcagagtgtgtcattgagcat
ctgacatcgtgggcacagctgcagttggaggacaaagcgcacatttctgatgagcacaag
aaacaccagatggttgtagctcaagtgatggtggaggcgctgaaatacttgcatgtaata
caaaaacaagatgctcttaagtgcatggagtgcgagaacaacctcatcatgtttaaagcg
atctcccaccttcaagaggactttgacgttttcttcacacctaccaactttgaagatccg
aaaattagaaaacaaatccaagagcgccatattactgcatatgaaaacactcgatcccga
cactcttccaagcagaagactgtgacaactcccgttgtggctaatgatccggacggaaag
acaaagactatttccacagaggccggcttacgccgactggggagacaacttcaacgcaca
gagcaggagctctggtcggatctgggtctgcgggctctgaaagtgggaaaggtggacaag
gcgctcaagatcttcagcgagctgtatgaacatcactgcaacagcagcaccgggaaggtt
ttgttcaccgccgcaaggatgctgtgtcagatgctggaggcagatgttcccatggtgatt
ccaaaggatatggacctaccagcagttattcatgacctcgcctgtcaggccatcagcgtg
tgtcactctgatttgctcctggactgtttggagctttgcaaaggcacacggacagcaatg
gatgtgtaccagcagtgccagttatctgataactacggcttcatagccaaggatttctct
gtggaagctggaaaagatcaccattctcagtggacgtttcaagatgttttcagtgaggac
tgcattgttctggatccattgtcggttctgcctgtgcagtatgaaattaccaactgtctt
ctccctctatctcaggatgctaaactgtacccgctggactgttcctgtctgtcccattgt
tcatttgctgacggttcaaactacttgcgggtgctcctcgggcccctttccaacatgcta
cagatgctgcaggagtgtagtcagctggaattagccctcagagttcttgttaactcatat
ggcagctgcctgcagcatgtcacctccaacatcatggacataaacctaagtgtgcagctt
tacgatcctcaggaccttaagaagtacagcttgtgtttaaacaacttccaaaagacgaca
acttccactctaaattccgtggctgtagctctgttaaacaaggtgttcaattggagggtg
gtcgattgtgatttggctataggcctctgcacactcctcaccagagcagaagttttcaaa
actctgtggaaagtcatcgacaacacttggcaaaactatgacaagattttggctgttgca
aagattggagccaatctcagctgcttgtacaaggaaccagaggaactgaagaagtttctc
tctgtcatcactgatgctgaatggggcattaagcttggcaaattagagatatctattcag
ccagtattccgccagcaaccagagatgaagagtaatttgatccctgttttggtgaagaac
aaaaagatcaccccagatgtcatcctccagtactgcagcacctttggtttggatcgtgac
catgtgatcaaccagtacattaccaccttactgctgctccaagaggatgaagacaatatg
gaagccctagcttcagggcttgaagaggaggtgcagtctttgtgtcacgctgacgctctg
gagcgagtcctgcagattatcccgatgttgcacagcaccagcgagctgactggcaacctc
tgtgctgccatgtttaagctcagcccttacaactacgagaggatagaagtggtcctaaaa
atcatccaggctgcagatgagaatgtggccaccttctccgttagccaggcaatgggtctc
cttcagcaccttaagtcctacaaaagggtctctcctccagcagatgtggagaacacgcat
ctgcttgaaaacggcttgctgccgaaccccctctccaacagcagactgcctttccatttg
ctgctgcagtccaaacattactggaaaattatctctcctgagctaagtgaggagactttc
cctacactacttcttattagcaaacttatgaaggtgagcctcgacaagttatacatgtca
gcagcaaaccatgtgtttgagaaaaagattaaacctttactcctggagaaaaagaaaatg
ggtcacagctatgcctacaacgagcaaacctttaaagtggccaagaccatgatgatgtac
atccagtgcatccagagcccggagtgggcagctgctacagcccacaagataacacaggag
cttccaccaggttatgagaaaacacaatctctgaggttctgtttggttcttggtgatgca
tggctccgggacccaaacttagaggaggctgcaagagccagaggagagacctttctgtcc
aagctgaagctgcagtttcagcgctctgccactgagaatgtgctgatgactagccagctg
agcaaccctgaaaacctgaaactgactgggcttccaggcaggcttgttgtggccttgtac
gaacacaacagcgtggagcagcgttataaggagacgggggttcagaattacccagacata
catgctgcagtcaaagaaatatccacaatcaacaatgtggatctcaaaaaaatccgcaac
atgcttttagagaaatggatctgcaagacgggtccagcaatgaccagggaaatgggaatt
caagactgcgtcaccaacattgatgaggacccggacttaatgagggttgtctacatgctg
cagtctttctccatggaggacgcattccatattttaagccctatcttgtctgctgaaact
tggcccttcagcacatccggacctcgcctgaccttctgccaccggacccgggcgctgctt
tgtctcgtccgccttgtcgatgcagcgatgctggaggctcagctgcagatcccccggacc
aagcttctaaattacctgaaatgctacatctttgtgtctcaactggaagctttgaacatc
ccgtacacagtccagtcctttctcaatagtcccaaagaaggcttggtgaaaggtctgtgg
aagaaccacagtcacgagccacaggctgtgcgtctcgtggccgacctgtgtttggagtac
caggtgtatgatcctcagctgtggaacagtctgcttcagaagctcctgggcttcaacttg
atcagtcatcttcagaaagtccttgaagcaattgtgtctgttccagctctgtgggagatt
ccaagtttctgtaggacttggaggagtatcattctggcaccttttgtctcagcctcagtt
cctctaagtccagaacaacaagcaactctctacaggacttttgttcttctactcaagtgc
cctttcctgttgaatttggacttgattggaattgcaaaccgatttgcgcagttcaacctc
cccgcctttgccctgggaactctcctcctaattccctgtgccagcaaaaaggaacagcag
attcaaggctttctgtctttgtgtaacccagtgacagtcctggagcaggtggaagaactc
atgaacactggcgaattggctggaatcccttcacagatcagggagactgtgctaacattc
atcagccagaacggccagcaccagaagctaatgaagaccaagcacttcgatcatctgaaa
aagcttattttctcacgaggccaaactgagcaggtgaaggatttagtcgattacttgacc
agccagaattgtgaggatgacgccgacctgctcgcccacgaatactcgaagcatcgcgag
aatcaacaaggaagatctctaaaaagtgaaataaatggctgcatgaaggaatatcttcac
ttgcaaaatggagtgtctggataa
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integrated database retrieval system
