Oryzias melastigma (Indian medaka): 112148481
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Entry
112148481 CDS
T07439
Symbol
snx18a
Name
(RefSeq) sorting nexin-18a
KO
K17923
sorting nexin-9/18/33
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112148481 (snx18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148481 (snx18a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112148481 (snx18a)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112148481 (snx18a)
Macropinocytosis
Sorting nexins
112148481 (snx18a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112148481 (snx18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
Vps5
XFP
DUF6335
Motif
Other DBs
NCBI-GeneID:
112148481
NCBI-ProteinID:
XP_024131405
Ensembl:
ENSOMEG00000015951
LinkDB
All DBs
Position
LG9:complement(6477937..6491782)
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AA seq
565 aa
AA seq
DB search
MALRARVLYDFTSENPGELSVKESEVLTLYSEQDIEGWLEGANSRGERGLFPASYVEILR
SDNSCRTSADTFADSRYSNAKPSGFDGTFQQPPVEPFPKSSSSLSTFSVPLTQASDDDWD
DDWDDSSTVADEPVGGRYHEGNGPSTYRVSTSTGSRGNAQHAKSSATVSRNLNRFSTFVK
SGGEAFVLGEAAGFVKDGDKICVVMGQYGPEWQENPYPFTCAIDDPTKQTKFKGMKSYIS
YKLTPTHTQNPVNRRYKHFDWLYARLVEKFPVISVPHIPEKQATGRFEEDFISKRRKGLM
WWMNHMTSHPVLARCDVFQHFLTCNSADEKAWKQGKRKAEKDDMVGANFFLTISPPAAPL
DFQEVESKVDGFKTFSKRMDDSTLQLHATVSEFARKQMSGFKKEYQKVGMSFKFLSQAFE
MDQQTYSAGLNHAISFTGDTYEAIGEYFSEQPSRDLDPVMDLLALYQGHLANYPDIIHVQ
KGALTKVKDSQKHVEEGKMDRAQADGISDRCNIISYATLAEIQHFHQIRVRDFKAQMQHY
LQQQITFFQKITGKLEEALQKYDSA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagggccagagtgctgtacgacttcacctccgagaacccgggggagctgtcg
gtgaaggagagcgaggtcctaactttgtacagcgagcaggacatcgagggctggctcgag
ggggcgaacagccgcggggagcgagggctcttccccgcgtcctacgtggagatcctgagg
agcgacaacagctgcagaacatctgccgacactttcgcggactctcggtactccaacgcg
aagccctcggggttcgacggcactttccagcagcccccggtggagccctttcccaagtcc
tcctcgagtctgtcgactttctccgttccgctaacgcaggccagcgacgacgactgggac
gatgactgggatgacagctccacggtggcggatgagcctgtaggggggaggtaccacgaa
ggtaacggaccctccacctacagagtgtccacctccacggggtccagaggaaacgcgcag
catgccaagagctcagccacagtcagcagaaacctgaacaggttctccaccttcgtcaag
tcaggtggagaagcctttgttctgggggaggctgcaggctttgtgaaggatggagacaag
atctgtgtggtgatgggtcagtatggtccagagtggcaggagaacccttaccccttcacc
tgcgccatcgatgaccccaccaaacagaccaaattcaagggcatgaaaagctacatctcc
tataagctgacacccacacacacgcagaacccagtgaacaggaggtacaagcactttgac
tggctttacgcccgcctggtggagaagtttcccgtcatctcggtgccacacatcccagag
aagcaggccacaggtcgctttgaggaggacttcatctccaagaggaggaaaggcctcatg
tggtggatgaaccacatgaccagccaccccgtcctggcccgctgtgacgttttccagcac
ttcctcacctgcaacagtgcagatgagaaggcctggaagcaaggcaagaggaaggcggag
aaggacgacatggtgggagccaacttcttcctcaccatcagccccccggcggctcctctg
gacttccaggaggtggagagcaaagtcgacggattcaagaccttctccaaaagaatggac
gacagcaccctgcagctccacgccacggtcagcgagttcgcacgcaagcagatgagcggc
ttcaagaaggagtatcagaaagtcggaatgtccttcaagtttctgagccaagccttcgag
atggaccagcagacgtattccgcaggactcaaccacgccatctccttcaccggagacacg
tacgaagcaatcggggagtacttttcagagcagcccagcagggatctggacccagtcatg
gatttgttagctctttaccaaggacacctggcaaactacccagacatcatccatgtacag
aaaggagctctgaccaaggtgaaagacagccaaaaacacgtggaggagggcaagatggac
cgggcccaggcggacggcatcagcgaccgctgcaacatcatctcctacgccacgcttgcc
gagatccagcacttccaccagatccgagtgcgggacttcaaggctcagatgcagcactac
ctgcagcagcagatcacctttttccagaaaatcacaggaaaactagaagaagccctgcag
aagtatgacagcgcctaa
DBGET
integrated database retrieval system
