Oryzias melastigma (Indian medaka): 112148532
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Entry
112148532 CDS
T07439
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112148532 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112148532 (smyd1b)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112148532 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
112148532 (smyd1b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112148532 (smyd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
Motif
Other DBs
NCBI-GeneID:
112148532
NCBI-ProteinID:
XP_024131487
Ensembl:
ENSOMEG00000020657
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Position
LG9:complement(8797667..8804394)
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AA seq
489 aa
AA seq
DB search
MENVVIFDSPGKGRGLKATKEFWAGDVIFSEASLAAVVFDSLAERICHSCFRRQEKLQRC
GQCKFAHYCDRTCQRAGWAEHKQECSAIKAYGKVPNENIRLVARILWRLDKDGTVVSDMQ
LTTLDELEDHITDMPEDELKELKVDIHNFLDFWPRTSKQHTVDNISHLFGVINCNGFSVS
DQRGLQAVGVGLFPNLCLVNHNCWPNCTVILNHGNQSAVNTMFHSQRRIELRSLGKIAEG
EELTVAYVDYMNLSEERQRLLKTQYFFDCTCEHCTNKTKDDIKLGGREVDGVKPSEEQVK
EATDYCFQMLEKMEKARLNGDYHEVVKICRECIEKTEPVLAETHIYLLRMWSTMSEVQAY
LQYFNDAAEYARKMVEGYMKLYHPNNATLGMAAMRAGVTHWQAGDIEVGHGMICKAYAIL
MVTHGPTHPITKDLEAMRVQTEMELRMFKQNEYVYYSMREAALKNKPMTMLHEPKSVEEG
IKNLFHRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtggtgatttttgactcacctgggaaagggaggggcttaaaggccaccaag
gagttttgggctggagacgtcatattctctgaggccagtcttgcagctgttgtgtttgac
agccttgcagaacgcatttgccacagctgtttccgcaggcaagagaagctccaaaggtgt
ggtcagtgtaaatttgctcattattgtgatcgaacctgccagcgtgctggctgggccgaa
cacaagcaagaatgcagtgccatcaaagcttatggaaaagtaccaaatgagaacatccga
ctagttgcccggatcctgtggcgcctcgacaaagatgggaccgtggtgtctgacatgcag
ctgaccacgctggacgagctggaggaccacatcactgacatgccagaagacgagctgaag
gaactcaaagtggacatccacaatttcctggacttctggccacggaccagcaagcagcac
acagtggacaacatctcccacttatttggggtgatcaactgcaatggcttctctgtgagc
gaccagaggggccttcaggcagtaggagtgggtctttttccaaatttgtgcctggtaaat
cacaactgctggccaaactgcacagtgatccttaatcacggcaatcaatcggctgtgaat
actatgtttcattctcaacggaggattgagcttcgctctctggggaaaatcgctgaagga
gaagagctcacagtcgcctatgtggactacatgaatctatcggaggagcggcagaggctt
ctgaaaactcagtacttctttgactgcacgtgtgaacactgcacgaacaaaaccaaagac
gacatcaagctgggaggaagggaagtggacggcgtgaagccttcagaagagcaagtcaaa
gaggcaacggattactgctttcagatgctggagaagatggagaaagctcgattaaatggc
gactaccatgaggtagtaaaaatctgcagggaatgcattgagaagacagaaccggttttg
gctgagacacacatttacttgctgaggatgtggagcacaatgagtgaagtgcaagcttac
ctgcagtacttcaacgatgctgcagaatacgccagaaaaatggtggagggatacatgaag
ctgtatcacccaaacaatgccactctcggtatggccgccatgcgagctggggtgactcac
tggcaggctggggatatagaagttggacatggcatgatctgcaaagcttatgctatcctc
atggtcacacatggtccaacgcaccccatcaccaaggacctggaggcgatgcgtgtgcag
acagaaatggaactgaggatgtttaaacagaacgagtacgtttactacagcatgagagaa
gccgctctgaaaaacaagcccatgaccatgctgcatgaacccaagtctgtggaagaagga
atcaagaatcttttccaccggaggaagtaa
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