Oryzias melastigma (Indian medaka): 112148544
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Entry
112148544 CDS
T07439
Symbol
si:dkey-88e18.2
Name
(RefSeq) interleukin-12 subunit beta isoform X1
KO
K05425
interleukin 12B
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04060
Cytokine-cytokine receptor interaction
oml04620
Toll-like receptor signaling pathway
oml04622
RIG-I-like receptor signaling pathway
oml04625
C-type lectin receptor signaling pathway
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112148544 (si:dkey-88e18.2)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112148544 (si:dkey-88e18.2)
04622 RIG-I-like receptor signaling pathway
112148544 (si:dkey-88e18.2)
04625 C-type lectin receptor signaling pathway
112148544 (si:dkey-88e18.2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112148544 (si:dkey-88e18.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112148544 (si:dkey-88e18.2)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112148544 (si:dkey-88e18.2)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Interleukins
112148544 (si:dkey-88e18.2)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Cytokines
112148544 (si:dkey-88e18.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL12p40_C
Ig_3
Ig_5
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
112148544
NCBI-ProteinID:
XP_024131507
Ensembl:
ENSOMEG00000016684
LinkDB
All DBs
Position
LG9:6913835..6921692
Genome browser
AA seq
343 aa
AA seq
DB search
MMILSVWTLGLLLVTFGGAHGHTNFPANFVVAKRNDPHPVTLTCNTQTEEGVSWRLDGEE
VELDNYVQMEGPNLKISEVDAPMLGEYSCWRGGTMLSSTYLFQELEEDVALDSLLNCRAK
SYDCNFTCSWRDSRFTAVRLGLGHDCSEGQRSCRWETSGGGHVGELQFVLPHSLSPYAEE
STTLELTAEAINTFYILRRTKTFYLRDIIQPDSPQIVRCQEVGHELNVTLDPPPSWSTPH
SFFSLEYEIEYEMKDDGKIESSFSTLIPKKISKLRVRSRDSLVLSAWSQWTAWQNVRKGK
KNRYRCKKGRHGDRQDSTPRSSDRLKTKRRHKKTGKQSKSRLI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgattttgtcagtgtggacacttggactcctcctagtcaccttcggaggagcacat
ggacacacaaactttcctgcaaactttgtggtggccaaaaggaatgatcctcatccagtc
acactgacctgcaacacacagacagaggaaggcgtctcttggaggttagacggggaagag
gtagagttggacaactatgttcagatggaggggccaaatctcaaaatatctgaagtagat
gcccccatgctgggggaatacagctgctggagagggggaacgatgctctcgtctacttat
ctgttccaagaactggaggaggacgtggcattagattctttgctgaattgtcgagcaaaa
tcctacgattgtaatttcacgtgcagctggagggacagtagatttacagcagtacgactt
ggacttggacacgactgcagtgaaggtcagcgttcgtgtcggtgggaaaccagcggcggc
ggccatgttggggaactccagtttgttctgcctcattcgctgtccccttatgctgaggaa
agtaccacgctggagctgacggctgaggccatcaacacgttttacatcctccgccggacc
aagacgttctacctcagagacatcattcagccggacagtcctcagatagtccggtgtcag
gaggtcggccatgagttaaacgtgacccttgaccctccgcccagctggtccacgcctcac
agcttcttcagtctggagtacgagattgaatatgaaatgaaagatgatggcaagattgag
agctcgttctctactctgataccaaagaagatcagcaagctgagggttcgctccagggac
tcgctggtgctctcagcctggagtcagtggactgcatggcaaaatgtcagaaaagggaaa
aagaatcgatacagatgcaaaaagggacgacatggtgaccgtcaagactcgacgcccagg
tcctcggaccgcctgaagacgaaacggaggcataaaaaaacaggaaagcagtcgaagagt
cgcttgatttaa
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