Oryzias melastigma (Indian medaka): 112148545
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Entry
112148545 CDS
T07439
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112148545 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112148545 (utp15)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112148545 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_IFT122_2nd
Beta-prop_HPS5
DUF7099
Motif
Other DBs
NCBI-GeneID:
112148545
NCBI-ProteinID:
XP_024131510
Ensembl:
ENSOMEG00000016645
LinkDB
All DBs
Position
LG9:complement(6900772..6907970)
Genome browser
AA seq
528 aa
AA seq
DB search
MASYKPTKIPVYPKLGEKVTGDTLYWKNYKTPIQIKEFGAVSNIDFSPVAPYNFAVTAFT
RIHLYGPLSQEPVKTYTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVGGKVALRMFKG
HTKAVHVTDFTSDRYQILTGSDDYTCCLWDIPNSVKLNTYQEHTDYIRCGVTSKLNRDLF
VTGSYDHSLKVFDARTDKSVMTINHGHPVESLLLYPSEGLLVSAGGRYVRVWDLLKGGQP
LVSLKNHHKTVTCLALSKNGQRLLSGSLDRHVKVYNTTTYKVVHNFDYPAAILSLALAPK
DKSIVVGMTNSILNIKHQKPSEKAKATAGHARRRPSYRVYSHRKRYNPKLDDYLVSKPVR
EHLAKYDKQLKKFNVSKALDRALEAGTKARKPEITVAVIKELDRRGTLKNALAGRDEQEL
SQLLRFMIGNLIDARFAPVLITPAEMILDIYQSVIGQSPVVDKQLLHLQSLLERELDYQK
DLLEVLGMLDTLFASSLPKMEVPCSGISTSNGLTLGESTASRPQVQVT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatataaaccaacaaaaattccagtttatcccaaactgggagaaaaggtcaca
ggagacacactgtactggaaaaactacaagactccaatccagataaaagaatttggagct
gtgtcaaacatcgacttttcccctgtggctccgtataattttgctgtgacagctttcaca
agaattcatctttacgggccgctctcccaggagcctgtcaagacttatacccgtttcaaa
gatacggcgtactgcggccgcttccggtcagacggtcagctgcttgtggcaggatgtgag
gactctgtcgttcggctctttgatgttggcggcaaagtggcgctgagaatgttcaaaggt
cacacaaaggccgttcatgtcacagacttcacctccgaccgttaccagatcctgacgggg
tcggatgactacacctgctgtctttgggatatcccaaactcagttaagctcaacacttac
caggaacacaccgattacatccgctgtggagtgacgagtaaactcaacagagatctcttt
gttacggggtcatacgatcactcactaaaagtttttgatgccagaacggacaaaagtgtg
atgaccatcaaccatggccacccggtggagagtctgctcctgtatccctctgaaggactg
ctcgtttctgcaggtgggcgctacgtgagagtgtgggatctgctgaaaggcggacagcct
ctggtgtctctgaagaaccatcacaaaacagtcacctgtttggctctcagcaaaaacggc
cagaggctgctgtccggctctctggacagacatgtgaaggtgtacaacacaaccacctat
aaagtggtccacaactttgactaccctgctgccatcctcagtctggctctggctccgaag
gataagtctattgttgtgggaatgaccaacagcattctgaacatcaaacaccagaaaccc
tcagagaaagcgaaggccaccgctggccacgcgaggcgacgcccatcgtaccgcgtttac
tcacacagaaaaagatacaatccaaaactggatgattatcttgtcagtaagccagtgagg
gagcatttggccaaatatgacaagcaactgaagaagtttaatgtgtctaaagctttggac
agagccttggaggccgggactaaagcgagaaagccggagatcaccgtcgctgtcataaag
gagctggatcgaagaggaactttgaagaacgctctcgcagggcgagacgagcaggagctc
tcacagctactcaggttcatgatcggaaatctgattgacgccaggtttgctccagtcctc
ataacaccagctgagatgatcctggacatctatcagtcggtcatcggtcagtccccagtc
gttgacaaacagctgctgcatctacagtccctgctggaaagagaactggactatcaaaag
gaccttctggaagttcttggcatgttagacaccttatttgcctcctctctgcctaaaatg
gaggtgccgtgctctgggatcagcacatcgaatggcctgactctgggagaatcgactgca
tcaagaccacaggttcaggtcacctga
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