Oryzias melastigma (Indian medaka): 112148548
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Entry
112148548 CDS
T07439
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148548
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112148548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
Ank
PH
Ank_2
C1_1
SOS1_NGEF_PH
PH_13
Prok-RING_1
Ank_5
STATa_Ig
Ank_4
Motif
Other DBs
NCBI-GeneID:
112148548
NCBI-ProteinID:
XP_024131519
LinkDB
All DBs
Position
LG9:complement(6839303..6900323)
Genome browser
AA seq
1784 aa
AA seq
DB search
MKLSRRKVPLYGEAKVFALLEGLDSVPEDVEVYVVLEGSTLTHVARAQSDVMLCFIVPGH
NLPEMVSVQAYLSSDSMPLTWAGASSLEYVYDDAQELAEHLVVHGHCLSSTDHKELSSLF
GLSQESSRWAVDRRVALAMANLDFPSKWNVLGTHSGNADRSPRESPLHLAVRWGLHRLAE
LLLCQPGGLMAANLPNEEGVTPLQLAQRAGNTDLVKLLLEPPNPLATPPAGLSQVWVDQS
RLLRFCHDTGNLTLTARQNPRWSAQQSRRAHILILRDRLRDMDFLKEIKALRRERPKTVF
GKEELVDDPEDSELYSGINGEKEDNLPSFYCGDIEEPLMFCLNEEDEEDDPSQSDSEKSQ
SIRESQASSPTLAAVARLSAMMHGQDRVYANAMLVGQVDDADISYRPPRKEEVPSHAGLS
CWNSFSPRAFDSESLSQNPYPPSPDHHEPRESRAPGLDNPRMSSPSPFASSPSFPSSPQT
SLCLSEEAQRRQPQTYSPLSPGLNCRGCSLTDANVGLSPSLECDSGDEDILGHSYPSSLK
HRPILRSSSGEERGSFDASPDFNRSHSDITPKTTKSSEDPEVRLRSYSYSSPKAKPSRPL
LNRDSAITDLEEGGTIGSSGRSLLQALSLSKSLSRLNQVKQRALNLTETPREKRIEDEEW
DKYIIPSKVETEKYKVSRTFSFLKNRMSSTRNKTKVKGKDMKEGKEKSGAANGHQFVPVS
QPAPALCVGCDKPVSGKELVQCSSCFVNVHKNCRESAAACGKKLQPERNAALVKNKTMSL
PHNSIKENSVFSSSSSSPSSMSTREKREAVGHFSKSLSLSVDSSRGLSDVAEADSECSMA
AFLSSSLSEEGSQVTSPSTDLPISTQDPVDAPVLSELSADQLGLDAESWSLAVTRDFCRK
LDRRTIKRQDVIYELMQTELHHIQTLTVMSEVFRRGMLEQLQLDLDCVARIFPCLDPLLL
FHRNLFRTLQERRHASSHPENSQNYLIHQIGDILLQQFSDENAEKMKQLYGEFCSHHIEA
VNVFKELQQQNKKLQNFVRQQSNNSLVRRREVPEFILLVTQRITKYPVLLERILQHTQEE
SQDHLDLSKALAQIRDIIAGVDLTVNKYEKCQELQEVLTRLDIKSFAKLKNGKVFRKQDL
HSKHRNLQHKGLVFWKTATGRLKDTLALLLTDVLVFLQEKDQRFIFASVDQKPPVIPLQK
LIVREVANEERGMFLISASSAGPEMYEVHTSTREERNAWMRHIRQAVESCPEEEEEEERN
TETEEARQAAEVRIQKINKFQDALFGQDQRIFHSLEEKLQLYAELTELTLPSPEAAPHRP
LLVQPTQVSDGETPRQASSLLTAALREAENLINVLQTRNGFSTQSQSSPVGDGCSYSSVQ
ESPSEPDYLSTLSMSSTSLGSDSESAGLDNVSWSPASEFRKADKGTLLKVAESVQNLTQL
LYSLQAAVTFQDSCYEVYKLLLLDGEKHQLRNFASLQNSLEQEKQKNTDKMKEEKKSIER
KKEEVDEVQKLHAKLKQEQLRWDKECSARERQQSEQEVVLEHREQQCFLETERLRCEREQ
LEAQLLEYQQNLDRLKEGQRSVELERKKIETQQRLLQTWRHSRQSSLPVTIPLDGYKMCN
HSRTGSLDGSCSVYKNEAALLASLQQNHHPTNNNQHQHALLMQRRNQDGPPHSSSYPSGS
SLSASLYNSLNTLLSQAHSKQPPDSRPRPPAEPLHPFGSRASTQPHNDLHLQPDAQPPSP
WRSEVTGLFKDDFFSSAPLLQPPAYLSLEGQIGDEVEEENVVYL
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaagcaggaggaaagtgcctctatatggtgaagcaaaggtgttcgcactgctg
gagggtttggattctgtgccagaggatgttgaggtgtatgtagttctggaagggtccacg
ctgacccatgtagccagagctcagagtgatgtcatgctctgcttcatcgtgcctggtcac
aacctgcctgagatggtctctgtccaggcctatctgtcctctgatagcatgcctctcacc
tgggcaggtgcgtcttcactagagtatgtgtacgatgacgctcaggagctggcagaacac
cttgttgttcatggacattgcttgagctccacagaccataaggagctgagcagcctcttt
ggcctgagtcaggagagctctcgctgggctgtggatcgcagagtcgccctggcgatggcc
aacctcgatttcccctctaagtggaatgtgctggggacccacagcggaaatgcagatcgc
agtcccagagaatcccccctccacctggctgtgcggtggggtctccatcggcttgcagag
ctgctgctctgtcagccgggggggttgatggctgccaatctcccaaatgaagaaggagtc
acccccctgcagctggcccagagagcgggcaacacggacctcgtcaagctgctattggag
cctcccaaccctctagccacgccccccgccggcctgtctcaggtgtgggtagaccagtct
cgtctgctgaggttttgtcacgacacaggaaacctgactctgactgcccgacaaaacccc
aggtggagcgcacagcagagccggcgcgctcacatcctaattctgagagaccggctcaga
gacatggacttcctcaaagagatcaaagcactcaggcgggaacgtccaaagaccgtcttt
gggaaggaggaactggtggatgatcctgaagacagtgagctgtactctggcattaatggt
gaaaaagaagacaatcttcccagcttctattgtggggacatcgaggagccgctgatgttt
tgcctgaacgaggaggatgaagaagacgacccgtcacagtctgactctgagaaaagtcag
tccataagggagagccaggcctcatccccaacgctggccgcagtggccagactgtcagcg
atgatgcacggccaagaccgggtctacgccaacgccatgctggtgggccaggtggacgac
gctgatataagttatcgccccccaagaaaggaagaggttccgtcccacgccggcctctcc
tgttggaattccttctctccgagggcttttgattcagagagcctctctcagaacccttac
ccgccatcacccgaccatcacgagccaagggagagccgagctcccggcctggacaatcct
cgcatgtcttccccctctccctttgcttcctccccgtctttcccttcctccccccagact
tccctttgtttgtccgaggaagcgcagagacgtcagccgcagacctactcccccctctct
cctggtttgaactgccgaggctgcagtttgacagatgcaaacgtgggcctgagcccaagt
ttagagtgtgacagtggggatgaagacatactgggacactcctacccctcgtccttaaag
cacagacccattctgagatccagctcgggagaggagagaggctcctttgacgcctcaccg
gattttaaccgctctcactctgacatcacacccaaaaccaccaagagttcagaggaccct
gaagttcgtctgcgctcgtactcctactcctcccccaaagctaagccctcccgacccctg
ctcaaccgagactcggccatcactgatctagaagaaggtggtacgatcggcagcagcggt
cgttctctgcttcaagctttatcactttctaaatcactttctcgtctcaaccaagttaag
cagagagcgctcaacctgactgagacgcccagagaaaagaggatcgaggatgaggagtgg
gataaatacataatcccttcaaaagttgagacagagaagtataaagtgagccggaccttc
agctttctgaagaacaggatgtccagcactcggaacaagaccaaggtgaaaggaaaagac
atgaaggaagggaaggagaagtcaggagccgctaacggacaccagtttgttcccgtgtct
cagccggctccggctctctgtgtgggctgtgacaagccggtttctgggaaggagctggtt
cagtgctccagctgcttcgttaacgtccataaaaactgcagagagtccgctgcagcttgt
ggaaagaagctgcagccggagaggaatgcagcgttggtgaaaaacaagaccatgtctctc
cctcacaactcgatcaaggaaaactccgttttctcctcgtcttcctcctccccttcttca
atgtcaacaagagaaaaaagagaagcagtcggccatttttccaaaagcttgtccttgtct
gtagatagcagcagaggactgagtgacgtcgcagaggcggacagcgagtgcagcatggca
gctttcctgagcagttcactgtctgaggaggggtcacaagtcacctccccctccaccgac
ctgccaatcagcacgcaggatccagttgacgctcctgtactgagtgagctgtcggccgat
cagctgggacttgatgccgagtcgtggagtctcgccgtcactcgggacttttgcaggaaa
ctcgacagacgcaccatcaaacggcaggatgttatttatgagctgatgcagacagagctg
caccacatccagactctgacggtcatgtcggaggtcttccggaggggcatgctggagcag
ctgcagctggacttggactgcgtggcgcggatcttcccgtgcctggacccgctgctgctg
ttccacagaaacctcttccgaactctgcaggagcgccgtcacgcgtcgtcgcatcccgag
aactcgcagaattacctcatccatcaaattggcgacatacttcttcagcagttttcagat
gagaatgcagagaagatgaagcagctgtatggagagttctgcagtcaccacattgaggct
gtgaatgttttcaaggagctccagcagcaaaacaaaaaacttcaaaactttgttcgacaa
caaagcaataactctcttgtcagacgaagagaggtcccagaattcatcctactggtcact
caacgcatcaccaagtatcctgtgctgctggagaggattttacagcacacccaggaggaa
agtcaagatcacctggacttatcaaaggctctggcacagatccgagacatcatcgcagga
gtggacctgactgtcaataagtatgagaaatgtcaggagctgcaggaagttctcaccagg
ctggatatcaagagctttgccaaactcaagaacgggaaagttttccgcaaacaggatctg
cacagcaaacacaggaaccttcaacacaaagggctggtcttctggaaaacggccacaggg
cggctaaaagacactttggctcttttactcacggatgttctggttttcttacaagagaaa
gaccagcgctttatatttgcctctgtggaccaaaagcctccagtgatccctctgcagaag
ctcatcgttcgagaagtagccaatgaggaacgaggaatgttccttatctctgcctcctca
gcggggccggagatgtacgaggttcacaccagcaccagagaggagaggaatgcatggatg
aggcacatccggcaggccgtggagagctgtcctgaggaagaagaggaggaggagcgaaac
actgagaccgaggaagccagacaagctgcagaagtgagaattcagaaaataaacaagttc
caggatgccctgtttggacaggaccagcggatcttccacagcttggaggagaagctgcag
ctttatgccgagctcaccgagctgacccttccttctccagaggctgcaccacatcgcccc
ctactggtgcagccaacacaagtcagcgacggcgagacgccacgtcaggcctccagtctg
ctcacagcagctctcagagaagcggagaaccttatcaacgtcctccagactcgaaatggt
ttctcaactcagagtcagagctctcctgttggcgacggctgcagctacagcagcgttcag
gagtctccctctgagccagattatctgagcacgctcagtatgagctccacttctcttgga
tccgacagtgagtcagcagggctggataacgtgtcctggagtccagcgtccgagttcaga
aaagcagacaaagggacgctactaaaggtggcagagagtgtccagaacttgactcagctt
ctctacagcctgcaggcagctgtgactttccaggacagctgttatgaagtttataaactt
cttttgttggatggagaaaagcatcagcttcgaaacttcgcctctcttcaaaactctttg
gaacaggagaagcagaagaatactgacaagatgaaagaagagaagaagagtatagagagg
aagaaagaagaggtggatgaggtgcagaagcttcatgccaaactgaaacaggagcagctg
cgctgggacaaagagtgttcggcccgagaaaggcaacagagcgagcaggaggttgtgctg
gagcatcgagagcagcagtgttttctggagacggagcgtctgcgctgcgagcgtgagcag
ctggaggcgcagctgctggagtatcagcaaaacctggacagactcaaagagggccagagg
agcgtggaactggagaggaagaagatcgagacccagcagaggctgcttcagacctggaga
cacagtcgccagagcagcctgcccgttacaataccactggatgggtacaagatgtgcaat
cacagccgcaccggtagcctggatggcagctgctctgtctacaaaaacgaggcggcctta
ctcgcctctctgcagcagaaccaccatccgaccaacaacaaccagcatcagcacgcgctc
ctgatgcagaggcggaaccaggacggcccgcctcacagctccagctacccctccggctcc
agcctgagcgccagcctctacaacagcctcaacaccctcctcagccaggcccacagcaaa
cagcccccggatagccgcccccgcccccccgccgagcccctccacccgttcggcagcagg
gcgtccacacaaccccacaacgatcttcacctgcagccggacgcgcaacctcccagcccc
tggaggtcagaggtcacaggactttttaaggacgacttcttttcctccgcaccccttctc
caaccgccggcttacctctctcttgaaggacaaatcggagacgaagtagaagaggagaac
gtcgtctacctctga
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integrated database retrieval system
