Oryzias melastigma (Indian medaka): 112148587
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Entry
112148587 CDS
T07439
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112148587 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112148587 (rorb)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112148587 (rorb)
Nuclear receptors [BR:
oml03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
112148587 (rorb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112148587
NCBI-ProteinID:
XP_024131589
Ensembl:
ENSOMEG00000012189
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Position
LG9:24733070..24753388
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AA seq
472 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALAR
VYSTSLTNGLSTLNHEIGGTYANGHVIDLPKGGHSNGGGIPGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQESHLGPNNVSMGELDRIAQNIIKSHLETCQYT
TEELQQLAWQTHSYEEIKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKSLGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMVMPK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccatgcaaaatctgtggagacaaatcatccggaatc
cattacggagtcattacgtgtgaaggatgtaagggtttcttcagacggagccagcagaac
aatgcctcgtattcctgcccccgccagaggaactgcctcatcgacagaacaaaccgcaac
cgctgccaacactgccgcctgcagaaatgtcttgcactaggaatgtccagagatgctgtt
aagtttggccgcatgtcaaagaagcaacgtgacagcctgtatgcagaggtgcagaagcac
caggcccggctgcaggagcagcggcagcagcagactggtgaagctgaagcactggctcgt
gtttactccaccagcctaaccaacggactatccacgctcaatcatgaaatcggagggaca
tatgccaatggtcacgtcatagacctacccaaaggcggccatagtaacggaggtggaatt
ccagggggctactatgggatggattctacccagccgtctccagatcagtcgggtttggac
atgtcaggcatgaagcacattaagcaggagccggtttatgaccttacccccgtacccaac
ctcttcagctacggaggctaccaggaaagtcatctcgggcctaacaatgtcagcatggga
gagctcgatcgtattgctcaaaatattatcaagtctcatttggagacttgtcagtacaca
acagaagagctccagcagctggcttggcagacacattcctatgaagagatcaaaatgtac
cagagcaagccccgggacgtgctgtggcagcagtgtgccatccagattacccatgcaatc
cagtatgtagtggagtttgccaagcgcatctcaggcttcatggaactgtgccagaatgac
caaatcctcctactcaagtcaggttgtttggaggtagtgttggtcaggatgtgcagagcc
tttaaccccctcaacaacactgtgctctttgaaggaaagtacggtggcatgcagatgttc
aaatctctaggttgtgacgacttagtaagtgcagtgtttgactttgccaagagtctgtgc
tcactgcagctaacagaggaggagattgctcttttttcggcagctgtactaatttctaca
gatcgaccctggctgatggaacctcgaaaagttcagaagctccaggagaagatctacttt
gctcttcaacacattatgcagaagaaccacatggatgaagatgcactggctaagctgatc
agccgaatcccaacactgtcagctctgtgcacgctccacacggaggagctccaggccttc
cagcaactccacccagaaacggtcaacgtcctctttcctccgctctacaaagaacttttt
aaccctgaccctaactccgccatggttatgcccaagtga
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