Oryzias melastigma (Indian medaka): 112148642
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Entry
112148642 CDS
T07439
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
oml03410
Base excision repair
oml03420
Nucleotide excision repair
oml03430
Mismatch repair
oml04110
Cell cycle
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112148642 (pcna)
03410 Base excision repair
112148642 (pcna)
03420 Nucleotide excision repair
112148642 (pcna)
03430 Mismatch repair
112148642 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112148642 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
112148642 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112148642 (pcna)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112148642 (pcna)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
112148642 (pcna)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
112148642 (pcna)
MMR (mismatch excision repair)
Other MMR factors
112148642 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
112148642 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
112148642
NCBI-ProteinID:
XP_024131651
Ensembl:
ENSOMEG00000018421
LinkDB
All DBs
Position
LG9:complement(7527346..7529704)
Genome browser
AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETINQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEEEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcctggtccaaggttccatcctgaaaaaggtcctggaggccctgaaa
gatctgatcacagaagcctgctgggacgtcagctcctcgggcatctctctgcagagcatg
gactcctctcatgtatccctggtccagctcactctccggcacgacggcttcgactcctac
cgctgcgatagaaacctcgccatgggagtcaaccttagcagcatgtccaaaatcctgaag
tgtgcaggaaatgaggatatcatcactctgagagcagaagacaacgccgacacgctcgcc
cttgtgtttgagactatcaaccaagaaaaagtttccgattatgaaatgaagctgatggac
ctggatgtggagcagctgggcattccggaacaagagtacagctgtgtggtaaagatgccc
tccggagagttcgctcgtatctgccgtgacctgtcgcagatcggcgacgccgtcatgatc
tcctgtgccaaagacggagtgaaattctccgcctcaggagagctgggtacaggaaacgtc
aagctgtcccagaccagcaatgtggacaaagaagaggaggccgtcaccattgagatgaac
gagcccgtccagctgatttttgccctcaactacctgaacttcttcactaaggccactcca
ctttcaaagaccgttacccttagcatgtctgctgatatcccccttgtggtggagtacaag
attgccgatatgggacacgtcaaatactacctggccccgaagatcgatgaagaagcttct
taa
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