Oryzias melastigma (Indian medaka): 112148644
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Entry
112148644 CDS
T07439
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148644 (fem1c)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
112148644 (fem1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_2
TPR_10
Motif
Other DBs
NCBI-GeneID:
112148644
NCBI-ProteinID:
XP_024131652
Ensembl:
ENSOMEG00000023298
LinkDB
All DBs
Position
LG9:complement(14728690..14739751)
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AA seq
618 aa
AA seq
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MDLKTAVFNAVRDGKLRLLQKLLENKDGHEVIKLMGEKTNGATPLLMAARYGHLELVEYL
LECCSAPVEVGGSVSFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVKYLVEHSADLEVANRHGHTCLMISCYKGHKDIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLEIMQMLLQYGATMEQDAYGMTPILSASVTGHTNIVDYLTTLPQTS
HTKRIDALELLGATFVDKKRDLLGALKYWKRAMDLRYVDSNSIVHKPEPKQLVMAYDYAR
EVTNAEELDSLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALEMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILTKSVM
EIERAIKQSGPMPPDPAQLSKALSIILHLICLLEKVPCTAEQDHFKKETIYRFLKLQPCG
KNGYSPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNG
HPDIMNLLISSGTHFDSTNAFQQTACDLLDEKELARNVIQPINHTTLQCLAARAIVKHSL
AYQGNIPEKLEAFILLHR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaacggcagtgttcaacgcggtgcgggatggaaagctccgtttgcttcag
aaactcttggagaacaaagatggacacgaggtgatcaagctgatgggcgagaagacgaac
ggagctaccccgctcctcatggccgcccgctacgggcacctggagctggtggagtatctg
ctggagtgctgcagcgctcccgtggaggtcggcgggtcggtgagcttcgacggggagacg
atcgagggggcgccacccctgtgggctgcctcggcggcgggtcacctgaaagtggtccag
tctctgctgggtcacggagcctcggtgaacagcacgaccctcactaactccacacctctc
agggcggcctgctttgacggccacctggacatagtgaaatacctcgtagagcacagcgct
gacctggaggtggcgaacagacatggccacacgtgtctcatgatttcctgctacaagggg
cacaaagacatagcgcagtacctgctggagaaaggcgcagatgtcaataggaaaagtgtt
aaaggcaacacggcgctccatgactgtgcggagtcgggcagtctcgagatcatgcaaatg
ttgctacagtacggtgcaaccatggagcaggacgcctatggcatgacgcccatcctttct
gccagtgtaacgggccacactaacatcgtcgactacctgacgacactcccgcagacgagc
cacacgaagcgcatcgatgccctggagcttttaggagctacgtttgttgacaagaaaaga
gatctgctgggagccttgaaatactggaagagggcgatggacctcagatacgtagacagt
aacagcatagttcacaaaccggagcccaagcagttggtcatggcatacgactacgccaga
gaggtgacaaacgcagaggagctggacagtttgatctccgacccggatgagatgcggatg
caggccctgcttattcgggagaggattctcgggccgcagcatccagacacgtcctactac
atccgttatagaggagccgtctacgccgattcgggaaactttgagcgctgcatcaacctg
tggaaatacgcgctggaaatgcagcagagcaacctggaccccctcagccccatgacggcg
tccagcctgctgtcgtttgcggagctcttctccttcatgctgcaggacagagccaaaggg
ctgctggggacctcggtgtcttttgaagacttgatgggaatattaaccaagagtgtgatg
gagattgagcgagcgatcaaacaaagcggacccatgcctcctgacccggctcagctcagc
aaggccctctccattatcctgcaccttatttgtcttttagagaaggtgccgtgtactgca
gaacaggaccatttcaagaaggaaaccatctatagatttttgaagcttcagccatgtggc
aagaacggctacagccctctacacttggcagtcgaccgcaacaccacctgcgtgggccgc
tatccagtctgcaagttcccctccctcacggtggcttcaatcctcctcgagtgcggagca
gacgtcaacagtagagacgaagatgacaacagccccctccatatagctgcatccaacggc
caccccgacattatgaacttgctgatttccagcgggactcactttgacagcaccaacgcc
ttccaacaaacagcctgcgatctcctggatgagaaggagctggccaggaatgtcatccag
cccattaaccacaccacgctgcagtgcctagctgccagggctatcgtcaagcacagcctt
gcttaccaaggaaacattcccgagaagctagaggccttcattttgctccacagataa
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