Oryzias melastigma (Indian medaka): 112148670
Help
Entry
112148670 CDS
T07439
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112148670 (tmc1)
03037 Cilium and associated proteins [BR:
oml03037
]
112148670 (tmc1)
Transporters [BR:
oml02000
]
Other transporters
Pores ion channels [TC:
1
]
112148670 (tmc1)
Cilium and associated proteins [BR:
oml03037
]
Other cilia and associated proteins
Stereociliary proteins
112148670 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
UPF0542
Motif
Other DBs
NCBI-GeneID:
112148670
NCBI-ProteinID:
XP_036069514
LinkDB
All DBs
Position
LG9:24586020..24597461
Genome browser
AA seq
931 aa
AA seq
DB search
MPRDSLIASDNDADITLEFEGGEEGGHKERRHREKRRDGSKDRRKRGNGRRRQGSRSVER
ENEEERVGEREKERKRRVKKDQEAKKRDKEEGDRAQTRSEKTAKAKKNIKNEKRRRSEKE
GEAGERTEKGKKKVQSAKKEKSVNHGTKDKTHEEKKKKRKKVLETSSEQETSEEDSEDKE
DSEDEEVKPESLSPEELEKLKEAVDDKKKLIQSLRGKPWPMKKKLVTLRESQEFLEKYEG
ALGKGKGRKLYAYKVMMMKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFL
RWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEASAMDFAVLWDFGGYAQY
SVLFYGFYSNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGVGDDNSFN
FSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLV
LCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPMLFDVISTLEN
YHPRVALQWQLGRIFALFLGNLYTFIIALMDEINVKRDEEKIVKFNITMWEASLYNGTVS
ENFTAPPITIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLVRFLNH
CWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWA
VMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKNRMFD
VIQETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEANVELKKKLQ
MQNEENKKKNKKAAQKALMDLEEARKVALESAGHQRNNNASYQGQQAREMQPATRVPRTI
NHRSHGNPGYLPNFPLQNETMIRRAPSLQRH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggacagtttgatcgcctctgataatgacgctgacattaccttggagtttgaa
ggtggtgaggaaggggggcacaaggaaagaagacaccgtgagaaaagaagagatggaagc
aaagacaggaggaagaggggaaatgggaggagaaggcaaggatccagatctgtagagaga
gaaaacgaggaggaaagagttggggaaagagagaaagaaaggaaaagaagagtcaaaaag
gatcaggaagcaaaaaaaagagacaaggaggagggggatcgtgctcagacgagaagtgaa
aaaactgcaaaagcaaaaaagaatattaaaaatgaaaaaagaagaaggtcagagaaagaa
ggagaggcaggagaaagaacagaaaaaggtaagaagaaagtgcaaagtgccaaaaaagag
aagagtgtgaaccacgggacaaaagataaaacacacgaagagaagaaaaaaaagcgcaag
aaggttttagaaacaagctcagaacaagagacgagtgaggaagactcagaggataaagaa
gacagtgaagatgaggaggtaaagcctgagagtctgtccccagaagagctggagaagctg
aaggaggcagtagacgacaagaaaaagctgatccaaagtttgagggggaaaccctggcca
atgaagaagaagcttgttactttgcgggagtctcaggagtttctggagaaatacgaggga
gctctggggaaaggaaaaggcaggaaactctatgcatacaaagtcatgatgatgaagaag
tggatgaagttccagcgagactttgaaaacttcaaaactgcctgcattccatgggagatg
aaaatcaaagagatagaaagtcatttcggctcctcggttgcctcatacttcatcttctta
aggtggatgtatggcatcaacatgatcttatttggtctgaccttcggcttggttatggtt
ccagaggcattgatggggcgaccgtatgggagcatcccaagaaagactgtacccagagct
gaggaggcctctgccatggactttgctgtcctctgggactttgggggttatgcccaatat
tctgtcctcttctatggtttctacagcaaccagcgtgccatcggctggctcaagttccgc
atgcctttgtcttacttcttagttggtgtggggacagtggcttacagctatatggttgtt
ataagaacgatggctcgtaatgcaaacgagtctggagttggagatgacaacagtttcaac
ttcagctggaagatgtttaccagctgggattacctgatagggaaccccgaaacggcagac
aataagtttgcctccatcaccactagctttaaggaggcaatattagaggagcaagaaagt
cgaaaggacgacaacatccatctgactcgcttcctgcgagtgctggcaaactttctggtt
ttgtgctgcttggctggaagcggatatctcatttattttgttgtgcggcgctctcaaaag
tttgccttagatggtttggaaaatcacacctggtgggaaagaaatgaggtgaacatggtc
atgtcactgctggggatgttctgccccatgctttttgacgtcatcagcaccctggagaac
taccatccacgtgtcgccctgcagtggcagctgggtcgcatcttcgccctctttttggga
aacctgtacacctttatcattgcactcatggatgagattaatgttaaaagagatgaggaa
aaaatagtaaagtttaacataaccatgtgggaagcaagtctttataatggtacagtatca
gaaaacttcaccgctccacccatcaccatccaccctgctgatgtgccccgaggaccctgc
tgggagaccatggtaggccaggagtttgttcggctgatcatctctgataccatgacgact
tacatcacgctgctgattggggacttcttacgggccgttcttgtacgttttctgaaccac
tgctggtgctgggaccttgaagctggatttccatcctactctgagtttgacgtcagcggg
aacgtcctgggcctcatcttcaatcagggaatgatatggatgggggccttctacgctccc
tgcctgcctgccttaaacgtcctgcggctgcatgtgtccatgtacctgcagtgctgggct
gtgatgtgctgcaatgtgccacaggagcgagtcttcaaagcttcaggctctaacaacttc
tacatggccatgctgctggtcattctcttcctctccactctgcctgctatctacaccatt
gtcactatccccccttcctttgactgtggacccttcagcggcaagaaccggatgtttgat
gtgatccaagagacgttggagtctgactttccagcctggttcagtaaagtgttcagctat
gcttccaatcctggtctagtgctgcccttcatattacttatggtattggccatttattac
ctgcaatctacatctaaaagctacaaagaagcaaatgtggaactgaagaaaaaacttcaa
atgcaaaatgaagaaaacaagaagaaaaacaagaaggccgcacaaaaagcactaatggat
ctggaggaggcaagaaaggttgcactggagtctgcaggccatcagagaaacaacaatgct
tcataccagggtcagcaggccagagagatgcaaccagccacaagagtcccaagaaccatc
aaccacaggagccacgggaacccaggatatctgcccaatttccctctgcaaaacgaaacc
atgatccgccgggcaccgagcctacagagacactga
DBGET
integrated database retrieval system
