Oryzias melastigma (Indian medaka): 112148700
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Entry
112148700 CDS
T07439
Symbol
rnf34a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34a isoform X2
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148700 (rnf34a)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112148700 (rnf34a)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112148700 (rnf34a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
ARMET_C
SAP
FYVE_CARP1-2
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112148700
NCBI-ProteinID:
XP_024131755
Ensembl:
ENSOMEG00000013065
LinkDB
All DBs
Position
LG9:24935362..24942685
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AA seq
380 aa
AA seq
DB search
MKAGASSVWASCCGILNEVMGTGAVRGQQPGFGAGAGPFRFAPSAGYSTYPPTSSGSPTL
VCKACGQAFTVFRRKHVCCDCRKSFCFLCCVLQENLRICATCHLLKATAFQRPRLMRLRV
KDLRQYLQLRNIPTDTCREKEDLVDLVLRHQGIEEEEEDDPDTASLRSRSLYTTAPSTTQ
SASELSAFAASQEEPLSRSDSSDTNQDIGDATSVSLLNLDPNEHTPEGSPQMRRRARASL
SDISSLRDIDGLSVRQLKEILARNFVNYSGCCEKWELVERVSRLYRETEENRKSLENVSS
TVTTVMAFPPPICNGAIGDGENCPLTIHDDNLCRICMDATIDCVLLECGHMVTCTKCGKR
MNECPICRQYVVRAVHVFKS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggggcctcgtccgtgtgggcttcatgctgtggtattttgaatgaagtcatg
ggaaccggggccgtcagaggtcagcagccggggtttggcgctggtgcggggccattcagg
tttgcccccagtgcgggatactcaacgtaccctcctacgagctcaggaagccccacgctg
gtgtgcaaggcctgtggtcaggccttcacagtcttcaggaggaagcatgtttgttgtgac
tgcaggaagagcttctgctttctgtgctgcgtgctgcaggaaaacctgcgcatctgtgcc
acttgccatttactgaaggccaccgcctttcaacgtccacgcctcatgcgactgcgtgtg
aaggacctgcgtcagtacttgcagctgcgaaacattcccaccgatacctgcagggagaag
gaagacctggtggatttggtgcttcgtcaccaaggcatcgaggaagaggaggaggacgac
cctgacacagccagccttcgctcgcgtagcctgtacacaacagccccctccaccacacag
tcggcctccgaactgtctgcctttgctgcctctcaggaggaacctcttagcagaagtgac
agctctgacaccaaccaggatataggggatgccacatcagtctccctccttaacttggat
cccaatgaacacactcctgaggggagtcctcagatgcggcgtcgagccagagcgtctcta
tcagacatctccagcctgagagacatcgacggtctgtctgtgaggcagctcaaagagatc
ctggccagaaacttcgtcaactattcagggtgctgtgagaagtgggagctggtggaacgc
gtcagcagactgtacagagagacggaggaaaacaggaagtccttggaaaatgtgagcagt
actgtaaccacagtgatggcctttccccctcctatctgcaatggtgccatcggagacggg
gagaactgcccgctgacgattcacgacgacaatctctgcaggatctgcatggacgccaca
atcgactgcgttctcctggagtgcggtcacatggtcacctgtacaaagtgtggcaaaagg
atgaacgagtgtcccatctgcaggcagtacgttgtaagggccgtgcatgtctttaagtcc
taa
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integrated database retrieval system
