Oryzias melastigma (Indian medaka): 112148748
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Entry
112148748 CDS
T07439
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04310
Wnt signaling pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112148748 (psen1)
04330 Notch signaling pathway
112148748 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112148748 (psen1)
Peptidases and inhibitors [BR:
oml01002
]
Aspartic peptidases
Family A22: presenilin family
112148748 (psen1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
112148748
NCBI-ProteinID:
XP_024131832
Ensembl:
ENSOMEG00000021438
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Position
LG22:complement(2038265..2048231)
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AA seq
474 aa
AA seq
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MANNAEDVENNVQDQPEPAAGPEPRRQQQGGTRLRSRGSSSAGGGEGGGPEQNGHPPAAR
PSVQEAEEDEDEEMTLKYGAKHVIMLFVPVTLCMAVVVATIKSVGFYTRKDGQRLIYTPF
PEDTDTVAERAVNSILNATIMITVIIVMTLVLVLLYKYRCYKVIHGWLFLSSLLLLFIFS
YMYLHEVFKTYNVAMDYFTLVIIIWNFGVVGMMCIHWKGPLRLQQAYLIMISALMALVFI
KYLPEWTAWLILAVISIYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNM
ADTGGPRRDSTEVAPPPQETPEAAAPEPAESPPPVSLSQDDGGFTPSWVSQQEHQLGQLQ
STEESRRQIQQMPTARPPTEEDEEERGVKLGLGDFIFYSMLVGKAAASGDWNTTLACFVA
ILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDKLALYQFYI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaacgcagaggatgttgaaaacaatgtgcaggaccagcccgagcccgccgca
ggcccagaaccccggcggcagcagcagggggggacacggttgcggtccagaggcagttcc
agcgctggtggaggtgagggtggaggacccgagcagaacgggcatccgcccgccgcccgt
ccatccgtgcaggaggcagaggaagacgaggatgaggagatgaccctgaaatacggcgcc
aagcacgtcatcatgctcttcgtccccgtgacgctctgcatggctgtcgtcgtggcaacc
ataaaatccgtcggcttctacactcgaaaggacggacagagactgatttacacgccgttc
cccgaggacacggacacggtggctgaaagagccgtgaactccatcctgaacgccaccatc
atgatcactgtaatcatcgtcatgacgctggtgctggtgctgctgtacaagtatcgctgc
tacaaggttatccacggctggctcttcctctcctccctcttactcctcttcatcttctcc
tacatgtacctccatgaagtttttaagacctacaatgtggccatggactacttcaccctg
gtgatcatcatctggaacttcggcgtggtgggcatgatgtgcatccactggaagggacct
ctgcgtctgcagcaggcctacctcatcatgatcagcgccctcatggcgctggtcttcatc
aagtacctgccggagtggaccgcctggctcatcctggccgtcatatccatctacgatctg
ctggcggttctttgtcctaaaggacctctgaggatcctggtcgagacggctcaggagcgg
aacgagcccatctttcccgctctcatctactcctctacaatggtatggctggtcaacatg
gccgacacgggcggtccgaggcgggactccactgaggtggctccgcccccacaggagacc
cctgaagcggcggcgccggagccggcggagtctccgccccccgtgagtctgtcgcaggac
gacgggggcttcaccccctcctgggtcagccagcaggagcaccagctggggcagctgcag
tccaccgaggagagccggcggcagatccagcagatgcccacggcccgcccccccacggag
gaggacgaggaggagcgcggcgtgaagctggggctgggagacttcatcttctacagcatg
ctggtggggaaggcggcggccagcggcgactggaacaccacgctggcctgcttcgtggcc
atcctgatcggcctgtgtctgaccctgctgctcctcgccatcttcaagaaggcgctgccc
gctctgcccatctccatcttcttcggcctggtcttctactttgccacggacaacctggtg
cgacccttcatggacaagctggcgctgtaccagttctacatttag
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