KEGG   Oryzias melastigma (Indian medaka): 112148748
Entry
112148748         CDS       T07439                                 
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X1
  KO
K04505  presenilin 1 [EC:3.4.23.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04310  Wnt signaling pathway
oml04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    112148748 (psen1)
   04330 Notch signaling pathway
    112148748 (psen1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:oml01002]
    112148748 (psen1)
Peptidases and inhibitors [BR:oml01002]
 Aspartic peptidases
  Family A22: presenilin family
   112148748 (psen1)
SSDB
Motif
Pfam: Presenilin
Other DBs
NCBI-GeneID: 112148748
NCBI-ProteinID: XP_024131832
Ensembl: ENSOMEG00000021438
LinkDB
Position
LG22:complement(2038265..2048231)
AA seq 474 aa
MANNAEDVENNVQDQPEPAAGPEPRRQQQGGTRLRSRGSSSAGGGEGGGPEQNGHPPAAR
PSVQEAEEDEDEEMTLKYGAKHVIMLFVPVTLCMAVVVATIKSVGFYTRKDGQRLIYTPF
PEDTDTVAERAVNSILNATIMITVIIVMTLVLVLLYKYRCYKVIHGWLFLSSLLLLFIFS
YMYLHEVFKTYNVAMDYFTLVIIIWNFGVVGMMCIHWKGPLRLQQAYLIMISALMALVFI
KYLPEWTAWLILAVISIYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNM
ADTGGPRRDSTEVAPPPQETPEAAAPEPAESPPPVSLSQDDGGFTPSWVSQQEHQLGQLQ
STEESRRQIQQMPTARPPTEEDEEERGVKLGLGDFIFYSMLVGKAAASGDWNTTLACFVA
ILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDKLALYQFYI
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggcgaacaacgcagaggatgttgaaaacaatgtgcaggaccagcccgagcccgccgca
ggcccagaaccccggcggcagcagcagggggggacacggttgcggtccagaggcagttcc
agcgctggtggaggtgagggtggaggacccgagcagaacgggcatccgcccgccgcccgt
ccatccgtgcaggaggcagaggaagacgaggatgaggagatgaccctgaaatacggcgcc
aagcacgtcatcatgctcttcgtccccgtgacgctctgcatggctgtcgtcgtggcaacc
ataaaatccgtcggcttctacactcgaaaggacggacagagactgatttacacgccgttc
cccgaggacacggacacggtggctgaaagagccgtgaactccatcctgaacgccaccatc
atgatcactgtaatcatcgtcatgacgctggtgctggtgctgctgtacaagtatcgctgc
tacaaggttatccacggctggctcttcctctcctccctcttactcctcttcatcttctcc
tacatgtacctccatgaagtttttaagacctacaatgtggccatggactacttcaccctg
gtgatcatcatctggaacttcggcgtggtgggcatgatgtgcatccactggaagggacct
ctgcgtctgcagcaggcctacctcatcatgatcagcgccctcatggcgctggtcttcatc
aagtacctgccggagtggaccgcctggctcatcctggccgtcatatccatctacgatctg
ctggcggttctttgtcctaaaggacctctgaggatcctggtcgagacggctcaggagcgg
aacgagcccatctttcccgctctcatctactcctctacaatggtatggctggtcaacatg
gccgacacgggcggtccgaggcgggactccactgaggtggctccgcccccacaggagacc
cctgaagcggcggcgccggagccggcggagtctccgccccccgtgagtctgtcgcaggac
gacgggggcttcaccccctcctgggtcagccagcaggagcaccagctggggcagctgcag
tccaccgaggagagccggcggcagatccagcagatgcccacggcccgcccccccacggag
gaggacgaggaggagcgcggcgtgaagctggggctgggagacttcatcttctacagcatg
ctggtggggaaggcggcggccagcggcgactggaacaccacgctggcctgcttcgtggcc
atcctgatcggcctgtgtctgaccctgctgctcctcgccatcttcaagaaggcgctgccc
gctctgcccatctccatcttcttcggcctggtcttctactttgccacggacaacctggtg
cgacccttcatggacaagctggcgctgtaccagttctacatttag

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