Oryzias melastigma (Indian medaka): 112148788
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Entry
112148788 CDS
T07439
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X2
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oml01100
Metabolic pathways
Module
oml_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112148788
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112148788
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
112148788
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
112148788
Glycosyltransferases [BR:
oml01003
]
Glycan extension
O-Glycan
112148788
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
KELK
BCDHK_Adom3
HB_LcnD
Motif
Other DBs
NCBI-GeneID:
112148788
NCBI-ProteinID:
XP_024131905
Ensembl:
ENSOMEG00000020318
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All DBs
Position
LG9:8667857..8675385
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AA seq
526 aa
AA seq
DB search
MFRRWLLALMARFGLVGVGFSCCLLLLYLLACKPASNRKKQSLLWPEGTTSKEGFMALLQ
EREDSHRHYINSLTKQIAELKDALQERTLQLQESLDKAKAKGILPQGLESLHKATMQSDL
KEFFRSQLNQAEVTSGVSLPSEYAAIPFDAFTLQTVYQLETGLSKHPAERLVRKDRKDEL
ISTVETGLHILNGPQQHHEDTRRKHTCSPADFIQGLTRTERNRGTVYELVFKGDGPQDFT
QLLLFRPFGPPMKVKSESVDTRSTVINIIIPLSKRMEAFRSFMGNFREVCIQQNIKVHLT
VVYFGKEEVDQVKSVLDQTTRETRFRSFTLIQLNEDFSRGRGLEVGARAWRRRQNVLLFF
CDVDIHFTADFLTSCRMNAEPGKKVFYPVLFSQYNPAVIYRNSSHLPPLQQQLVISQETG
FWRDFGFGMTCQYRSDFINIGGFDRSIKGWGLEDVHLYRKYLHSKLMVIRSPSRGLFHLW
HEKSCADELPPDKYKMCMQTKAMNEASHGQLGELYFRREKERHLDR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgttccggcgctggctcctggcactgatggctcgctttggcctcgtcggcgtgggcttc
agctgctgcctgctgctcctctatctcctggcctgtaaacctgcttctaacaggaagaaa
cagagcctgctttggccagaggggaccaccagtaaggagggattcatggctctgctgcag
gaaagggaggactctcacaggcactacatcaacagtttgacgaagcaaatcgctgagctg
aaggacgctcttcaggagcggacgctgcagctccaggagtccctggataaggctaaagcc
aaaggaattctgccgcagggtctggagagtctgcacaaagcgaccatgcagtccgacttg
aaggagttcttccgctcacagctgaaccaggcggaggtcacctcaggcgtgagtctgccc
agtgaatacgcagccattccctttgacgccttcaccctgcagacggtttaccagctggaa
acgggcctgtcgaagcacccggccgagaggctggtgaggaaagaccgcaaagatgagctg
atcagcaccgtggaaacgggtctgcacatcctgaacggaccccagcagcatcatgaggac
accaggaggaagcacacatgctccccagcagacttcattcagggcctgactcgcacagag
cgaaaccgtggtaccgtctatgagctggtgttcaaaggcgacggcccgcaggacttcacc
cagctccttctcttccggccgttcggccctcccatgaaggtgaagagcgagagcgtggac
actcgcagcaccgtcatcaacatcatcatcccgctctccaaaaggatggaggcgttcagg
agcttcatggggaacttccgagaggtgtgcatccagcagaacatcaaagttcatctcacc
gtcgtctattttgggaaagaggaggtggaccaagtgaagtcggtgctggatcagaccacc
agagagacccggttcaggagcttcacgctgatccagctgaatgaggacttttctcgaggc
cgaggcctcgaggtcggagccagggcttggagacggaggcagaacgtgctcctcttcttc
tgcgatgtcgacatccacttcactgctgatttcttgacgtcttgtcggatgaacgctgag
cctgggaaaaaagtcttctaccccgttcttttcagtcagtacaacccagcagtcatttac
aggaacagctcacacttaccccccctacaacaacagctggttatcagtcaggagactgga
ttctggcgagactttgggtttggcatgacgtgccagtacaggtcggacttcatcaacata
ggtgggttcgaccgcagcatcaaaggttgggggctggaggatgtgcacctctacaggaag
taccttcacagtaagctgatggtgatccgctcgccaagccgcggccttttccacttgtgg
cacgagaagagctgcgcagatgagcttcctccagacaaatacaagatgtgcatgcagacc
aaagcaatgaacgaagcctcgcacggccagctgggagagctctacttcagacgggagaaa
gaacggcatctagacagatga
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