Oryzias melastigma (Indian medaka): 112148810
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Entry
112148810 CDS
T07439
Symbol
si:dkey-250l23.4
Name
(RefSeq) uncharacterized protein si:dkey-250l23.4
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148810 (si:dkey-250l23.4)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112148810 (si:dkey-250l23.4)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112148810 (si:dkey-250l23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
LMBR1
RING_XB3-XBAT31
zf-RING_6
C1_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
112148810
NCBI-ProteinID:
XP_024131935
Ensembl:
ENSOMEG00000021591
LinkDB
All DBs
Position
LG9:complement(9703061..9762921)
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AA seq
511 aa
AA seq
DB search
MASRETDSASNGSSVEGKGGDENWEDNEHSRMETLCVKTLRSRQKNASGEGSSNNMEQLV
RPPLPGRKAHRKTCPEDIQGRWREGGPDREEGKQGSPLLGGRKVEKQRKFERADTHEETA
QERHPRESIKSLTGILEAGANHSHRGPSSPEPPGLGSTQTLPASLNPQFSQAAVQSKFTP
LSSLRRSPADVLSDTRTPSRNPDALWVEVRTCEQPIQGGQTHIPPLTLSEPEEEEEEEDL
DEETAEEEEGRRLTEVMAQASTSARVKPCGLAGERRMSKREKNRMKSLRRRQRRREKWRQ
QENKQSLTGIQSSSSSSEDEESLSMKKREGFICAVCLDVYFSPYICHPCNHIFCEPCLRT
LAKNSPTNTPCPLCRTVITHVFFQKELNQAARTFFPKEYLTRKQNFQKASCAKWPLPSCR
KIFRIFGAGFQRQSSPIPRRQFPHGGGYRLNSMDFEDESRGWRFDMDMGVEKQVSRHQEE
INMDSALGSEQEKDDEISTFHHFTLIFYVFL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgtgagacagactcggcttccaatggctcaagcgtggaaggtaaaggtgga
gatgaaaattgggaggacaatgagcactctagaatggagactctgtgtgtgaaaacactg
agatctagacagaagaatgcatctggagagggaagctccaacaacatggaacagctggtg
agacctcctttacctggaaggaaagcacacagaaagacctgccctgaggacatccaagga
agatggagggaaggaggtccagacagggaggagggcaaacaaggatctccacttttagga
ggaagaaaagtagaaaagcaaaggaaatttgaaagagcggacacacatgaagaaacagcc
caggagagacatccaagagaaagcattaaaagtctgactggcattttggaagctggagca
aaccactcacacaggggaccctcgagtcctgaacctccaggccttggctcaacccagact
ctccctgccagtttaaaccctcagttcagtcaggctgccgtccagagcaaattcacacct
ctgtcatcgctcagacgttctccagcagacgtgctcagcgacacacgcactccttcaaga
aatccagatgcattgtgggtggaggtgagaacatgtgaacaacccattcaaggcggtcaa
acacacatcccacctctcaccctctcggagccagaggaagaagaagaggaagaagacctg
gatgaggagacggcagaagaggaagaaggcagaagactgacagaagtcatggcccaagcc
tcgacctcggctagggtgaagccatgcggcctcgctggagagaggaggatgagtaaaaga
gagaagaacaggatgaagagtctgagaagaaggcagaggagaagagagaagtggagacag
caggaaaacaaacagagtttaactggtattcaatccagcagcagcagcagtgaggatgaa
gagtctctgagcatgaagaagagagaaggctttatctgcgccgtctgcttggacgtatac
ttcagtccatacatctgccatccttgcaatcacatcttctgtgaaccgtgtctgaggacg
ctggcgaagaacagccccaccaacacgccctgcccgctgtgcagaacggtcatcacccac
gtcttcttccagaaagaactaaaccaggcagcacggacgttcttcccaaaggaatactta
acccggaaacagaactttcagaaagcaagctgtgcaaagtggcctctcccaagctgtagg
aaaatcttccgcatttttggagcaggcttccagagacagtccagtccaattccgagacgc
cagtttccccacggaggaggctaccgcctgaacagcatggactttgaggacgaatctcga
ggctggagatttgacatggacatgggtgttgaaaaacaagtcagcaggcaccaagaggaa
ataaacatggactcagctttgggaagtgaacaggaaaaagatgacgaaatcagcacattt
catcattttactctaattttttatgtatttctataa
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