KEGG   Oryzias melastigma (Indian medaka): 112148845
Entry
112148845         CDS       T07439                                 
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112148845 (nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112148845 (nelfb)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     112148845 (nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 112148845
NCBI-ProteinID: XP_024131987
Ensembl: ENSOMEG00000003902
LinkDB
Position
LG9:32597836..32609308
AA seq 583 aa
MFAGLSELGISNGDDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVAVIADGKEEDRYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKLVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPSPKTRRQGEVVLKLTHMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDGKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLTLSIMRNLQELLSQESLPRDSSDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLDLEVVTRFLPAMMSVVVDDHTFTVEQKLPNEEKSSLTYPVALPDAFSRYLLNNRVA
CEMGLYYVLHIAKLRNKNALQRLLPALVDTYNDMAFSDIFLHLLTGHLTLLSDEFGSADF
CSVVFDGFLLTSFSSKENVHRHALRLLLHLHQKVLPSYMETLMKTLEAPKQCSEPLKELY
TQLTEKLEAHKKSPPPLEKSPSLDMGLHPVTVTPNASVPTTPV
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgttcgcgggcctgtctgagctcggcatttcaaacggggatgatttgaaggaaacactc
accaactgcacggagccgctgaaagccatcgaccagtttcagatggaaaatgggatcctg
ttgccaacgctccagtcggctcttcctttcctggacctccacggcactccgcggctggag
ttccaccagtctgtctttgacgagctccgcgacaagttgatggagcgagttgctgtcatt
gcagacggcaaagaagaagatcggtatggaaagctggaggagcttctggagaaaagcttt
ccacttgtgaaaatgccgtccattcagccggtggtgatgcaggtgctaaagcatctgcca
aaggtgccagaaaagaagctgaagttggtaatggctgacaaagagctgtacaaggtgtgt
gcggtggaggtcaaaaggcagatttggcaggacaaccaggctctttttggggatgaagtg
tccccccttctaaagcagtacatcgtggagaaagaggcagctctctttagcagcgacctc
tccattctgcacaacttcttcagcccttctccgaagacacgacgccaaggcgaggtggtg
ctgaagttgactcacatgattgggaagaatgtgaagctgtacgacatggtgctgcagttt
ttacgaacgctcttcctgcgaacgcggaacgtccactactgcactctgagagcagagctg
ctgatgtctctccacgacctggacatcagtgagatctgctctgtggacccctgtcacaag
ttcacttggtgtttggacgcctgcatccgtgagaagtttgttgatggtaagcgagcaaga
gagctccaaggtttcttagatggggtgaagaaaggacaggagcaagttcttggggactta
tccatgatcctctgtgatccatttgcctgtaacaccttgactctgagtatcatgcggaac
ttacaagagctgctgagtcaggaatccttacccagagacagttcggacctgatgctgctg
ctcaggatgctgtctctgggtcagggagcgtgggacatgatcgacagccaggtcttcaaa
gagccgcgtttggatttagaggtggtgacccgctttctgcctgcaatgatgtcagtggtt
gttgatgatcacaccttcactgtggaacagaagcttcccaatgaagagaagagctcgcta
acgtaccccgtagctctgccagatgcatttagcagatacctgctgaacaacagagtggct
tgtgaaatgggtctctactacgtgcttcacattgccaagctaaggaataagaacgcctta
cagcgattattacctgctcttgtggacacctacaacgacatggccttcagtgacattttc
cttcacctgctgaccggacacctcacactactctctgatgagtttggatcagcagatttc
tgttcagttgtttttgatggctttcttctaacctcattctccagcaaagaaaatgtccac
agacacgcccttcgcttgttgctgcatttgcatcagaaagtgctgccgtcatacatggaa
acactgatgaaaactcttgaagctccaaagcagtgcagcgagccactcaaggagctctac
actcagctgacggagaagctggaggcacacaagaaaagcccaccgcctctagaaaagtct
ccgtcattggacatggggctccatcctgtgaccgtgactccgaatgcttccgttccgact
acgcccgtgtga

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