Oryzias melastigma (Indian medaka): 112148865
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Entry
112148865 CDS
T07439
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112148865 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112148865 (thoc5)
03041 Spliceosome [BR:
oml03041
]
112148865 (thoc5)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112148865 (thoc5)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112148865 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
112148865
NCBI-ProteinID:
XP_024132029
Ensembl:
ENSOMEG00000003930
UniProt:
A0A3B3BBQ1
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All DBs
Position
LG9:19373372..19381778
Genome browser
AA seq
683 aa
AA seq
DB search
MASDSIKKRKSKVLRNEGVPEMKRGRGDVEQQDARVYNEEVELDGREPEQDYMQFKESCK
ALASLMSEIQELKANGAKEGSVEVEQKRMQSCILFMTLKKFNRLAHMRLKRGRDQTHEAK
QKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYRDAPQDISRPQLTK
DDPHQLTLARLDWELEQRKRLAEKYKESQSTKEKIQKSIEVKKEHLRSLQPGLNAIMQAS
LPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYSQACDKNLSVSINGDVDEAKAL
SKPPDDSHDDESDSDAEEEQEKTKRRRPTTGGQLDDKRKEMLKRHPLSLCIDLKSKDGSI
LHLYFYYLMNLNIMTVKTTVSTNTDLTTAISAGELLKSDTLLSCLYTNDQGRETPNPANR
YQFDKVGIVTFADYVEDLGYPYKWVQDLGGLHFPSDTSEGVLIGSSLSASHMENTMKLLR
GRVQSRLALHKQFSSLEHSIIPISSECQNLFPAKIISRLARWTTISQPEYMELPYTRHVT
DAGLAKECDLYFMAVVERGTARLHAAVVLSPRYPEISPLFSLSLSWKGECTGRTDDNLRA
MESEVNVFKNELQGPRPGYQLLTNQVARLCVCLDVYLETEGQDDSVEGPREFPREKMCLR
TVRGPNRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgactccataaagaagcgcaagtcgaaggttcttcgtaacgaaggagtccct
gagatgaagcgaggccgaggggacgtcgagcagcaggatgcccgtgtctataatgaagag
gtggagctggacggcagggagcctgaacaagactacatgcagtttaaagaatcctgtaag
gctctggcttctctcatgagtgagatccaggagctcaaagctaatggagccaaagagggg
agtgtggaggttgagcagaaacgcatgcagagctgcattctcttcatgaccttgaagaaa
ttcaaccgcctggctcacatgcggctaaagagaggccgagaccaaacacacgaggcaaaa
cagaaggtggatgtgctgcaccttcagctgcaaaacctgctgtatgaagtcatgcatctt
cagaaggagatcagcaaatgtctggagttcaagtcaaagcatgaagaaatagatttagtt
agtgaggaggagttttaccgagatgctcctcaagacatctccagacctcagctcactaaa
gacgacccacaccagctcacactggcacggctggactgggagcttgaacagaggaagaga
ttggcagagaaatataaggagtctcagtcaacgaaggagaaaatccagaagagcattgag
gtgaagaaggagcatctgagaagcttacagccaggactgaatgccatcatgcaggcttct
ctcccggtgcaggagtatttgtccatgccttttgaacaaactcagaagcagacggagatc
gcccgccaccttcctccccccctttatgtgctgtttgttcaagcgaatgcctacagccag
gcttgtgacaagaatctgagtgtgtccatcaacggtgatgtggatgaggccaaagctctg
tccaaacctccagatgactctcatgatgatgaaagtgactcagatgcagaggaggagcag
gagaaaacgaagagaagaaggccaacaactggaggacagctggatgacaaaagaaaagag
atgctgaaaagacaccctctgtccctgtgcatagacctgaagagtaaagacggcagcatc
ctccacctctacttctactatctgatgaatctgaacatcatgacggtcaagaccaccgtc
tccaccaacactgacctcaccacagccatcagtgcgggggagcttctgaaatcagacact
ctcctcagctgtctctacactaatgaccaaggaagagaaactcccaatccagctaaccgc
taccagtttgataaagtggggattgtcacctttgctgattatgtggaagacttgggttat
ccctacaagtgggttcaggatcttggaggcctccattttccatcggatacctcagagggt
gtgctgataggcagctctctgagtgccagtcacatggagaacactatgaagctgctgagg
ggacgagtccagtcccgcctggctctgcataaacagttttcctctttagagcacagcatc
atcccaatctccagcgagtgtcagaatctatttcctgccaaaattatctcacgcctggca
cgttggaccaccatcagccagcctgagtacatggaactgccgtatacgcgtcacgtcacg
gatgctgggcttgcaaaggaatgtgatctgtattttatggcggtggttgaaagaggcaca
gctcgtctccatgctgcagtggtgctgagtccgcgttacccagagatctcgccgcttttc
tccctctccctcagctggaaaggagaatgcacaggaagaaccgacgacaacctcagagca
atggagagtgaggtcaacgtgtttaagaacgagctgcagggaccgcgtccaggataccag
cttctgaccaaccaggtagcacggctgtgtgtctgcctggatgtgtatttggagacggaa
ggacaagatgacagcgtggaaggacccagagagttccctcgtgagaagatgtgtctgcgc
accgtaaggggtccaaatcgtctgaagccattcaagtacaaccatcctcaagggttcttc
agtcaccgttaa
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integrated database retrieval system
