Oryzias melastigma (Indian medaka): 112148884
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Entry
112148884 CDS
T07439
Symbol
mef2cb
Name
(RefSeq) myocyte enhancer factor 2cb isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112148884 (mef2cb)
04371 Apelin signaling pathway
112148884 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112148884 (mef2cb)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
112148884 (mef2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
112148884
NCBI-ProteinID:
XP_024132066
Ensembl:
ENSOMEG00000006457
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All DBs
Position
LG9:complement(20946138..21013488)
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AA seq
475 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCQAVPPSNYDMPVSIPVSNQNNLIYSHPGGTLGNHNLLPLTHHGLQR
NSMSPGVTHRPPSAGNTGGLMGADLTTGAGTSAGNGYGNHRNSPGLLVSPGGMNKNMQTK
SPPPMNLGMNNRKPDLRVLIPPGGKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQG
MGGYPSAISTSYGTEYSLNSADLSSLSGFNSGSSLHLGSVSGWQQQHLQNMQHSALGQLG
NCSSSHLCQGSNLSLPSAQSLHIKSEPVSPPRDRTSSTPGGYGGGVPPPQNPSSRQDSGR
SPVDSLSSCSSSHEGSDRDEHRNEFHSPLGLGRPALDERESPSIKRVRLSEGWAT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacacggattatggatgaacgcaacagacaggtgaca
tttacgaagcgaaagtttggcctgatgaagaaggcgtacgagctgagtgtgctgtgtgac
tgtgagatcgccctgatcatcttcaacagcaccaacaagctgttccagtacgccagcaca
gacatggacaaggtcctgcttaaatacaccgagtacaacgagccccacgagagcagaacc
aactctgatattgtggagacattgagaaagaagggcctaaacggctgtgacagcccagac
cccgacgcagatgactcggttggccacagccccgagtccgaggacaagtacaggaaaata
aacgaggacattgatctaatgatcagcagacagagactgtgtcaggctgtgcccccatca
aactatgacatgcccgtatccattcccgttagcaaccagaacaatctaatctacagtcac
cccggtggtaccctaggcaaccacaatctgttgccgctgacacaccatggtctacagaga
aacagcatgtctcctggagtgacacacagacctcccagtgcaggtaacacaggtggcctc
atgggcgctgacctcaccactggcgcaggcaccagtgctggaaatggctacggaaatcat
cgcaactcgccaggcctgctggtttctcctggtggaatgaacaagaacatgcagacaaag
tctcccccaccaatgaacctgggcatgaacaaccgtaaacctgacctccgtgttttaatc
cctcccggcggcaagaacaacatgccctccattaaccagagaataaacaactcacagtcc
gctcagtcattggccaccccggtggtatccgtagcaactcccactctgcctggacaaggg
atgggcggatacccctctgccatctctacttcttacggtaccgagtattctctgaacagt
gcagacctgtcctcactgtctggcttcaacagtggcagctctctgcacctcggctcagtg
agtggatggcaacagcagcaccttcagaacatgcagcattcagccctcggtcagctggga
aattgctctagctcacacttatgtcagggttcaaatctctccctgccctctgctcaaagc
ctgcacatcaagtccgaacctgtttctcctcctagagatcgcaccagcagcacaccgggg
ggctacggtggcggggtgccacctccccagaacccctcgtcccgtcaggactcgggacgc
tcccccgttgatagcctgagcagttgtagcagctcccatgaaggcagcgaccgtgatgag
cacaggaacgagttccactcgcctcttggactggggcggcccgccctggatgagcgcgag
agcccctccatcaaacgggtgcgcctctcagagggatgggccacatga
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