Oryzias melastigma (Indian medaka): 112148995
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Entry
112148995 CDS
T07439
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112148995 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112148995 (bicra)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
112148995 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
112148995
NCBI-ProteinID:
XP_024132192
LinkDB
All DBs
Position
LG13:5180019..5197669
Genome browser
AA seq
1913 aa
AA seq
DB search
MLPSCFVYGVQRHRIQSGKTEVSCFLLEAGSCTAARARLSWRPRAACTSIVSVVMDDEDG
RCLLDVICDPEALNDFLHGSETHLDTDDLLDGSSDPSSSFFSTTGGHVSEVQPTVPLSVN
ESAGLPRVSVDLDFLEDDDILGGSPGGEGGSNGIGTNHEPCDILQQSLAEANITEQSLQE
AEAELDLGSFGIPGLTQVVQTLPDASLTGAGGAAVGVGIGGPAALFPGSVPSTTPTPPNA
TADMLGSVLAQQGLQLQPQVVNKAISVQPFVQQVGLGNVTIQPISSLQALSNGNQSGHLG
IGQIQVVGQPTVMTINQSGQPILAKAMGGYQLHQSGAEVSGAGSQSGLGGAGGGLLIQGN
KATLSSPALNGPAVCVSSANSSGGTMTAPSGLVGFGSTPLSSGVTPQAQTQGGQIMQNVI
IQRTPTPIQPKPPQGGAIQPKLFKQQPQQPSPVPQTLQNDAHKTLGIQQLPVSAAQNVTF
LTGKPGSNVVLSTQATTQAPQFQQSLFKQQGPQPSGKPLSVHLLNQPSSIVLQGQNHQFL
LPQLQAGGQILTQHPGGHIITSQGPGGQIIANQILTANQNINLSQVLTSQGPSGATHILS
GPIQLQSGQMGAPTLFQMPVASLAQTQSQTQTHTVSGGAQTVIQGMPIQNPLTMLGQVEG
LSPAVSLQPALQPQSGGVPSSTGAATVGQGQPGEAVAVLGGSADPAGHPTQQLLPQSSIL
TLQQASSVSSASTVSSSSPSISVSTTSSSVTAVGLAPPQAQHSPGRLLFTNQGQSMILSQ
ESLQMFLQQEQRHHTENESTPSVGVPASVIVSSNSITTAAPAVHDSQLADSWVGRSHSPP
PGPSHMTAVVKVPSSAAQQPLKIQGMSPSPALTTHPPTPPVAESPQPSQSPLVLGQQIQS
PHHQQRPPSQPQPQSQTPSRSCTPSSHPSLFIVPSQVAESPKPATQVQPQQTPPQQQHIQ
LQLQPLPRPPSLPAPYQQERPSMSQSPKPPSAPAAPQHPFTPAPASACATAVVKTQIPVQ
GLTAVHQQQLQLVGAQIQTLSSISQPSPQQKQLLEKLHQVQQNIMLQAKPAPQTPSQFMS
QQDVPVDKTIASSTSSDIPAQLPTMLQPTSVLVKTPASGQLQISSDLQVFSGAQGPALVN
QTVSPASLTQPAQVQPKPGVISSVGGMTLGKGGVKIQVLGATLTQMPAPQPLPVQTQTTT
MPFGGEPSKEARMLEQLRKHQGSVLHPNYSAPFHSFEDTLNRLLPYHLYQGTANSSQDYQ
RVDDEFEKVSCQLLKRTQAMVDKYRHLLFAESKAFKPEQRLGPSAEMVMIDRMFIQEEKS
ALTSDRAFAKEKPEEFLASVRKLDSISEPTEPPSVSGVAPVDPPVQAPVAPAAAPPLNVT
PIPPPASASAPVQAPAPVPAATPAPPFPPTKLVIKQGGGGASVSWTTSCPPAAPAKPASD
PVSQSFSRAPTTSSSSSSSSSLPSNSQDADDDDALPQRTSKPPIKTYEARRRIGLKLKIK
QDQTGFSKVVHNTALDPVHTPQPQLSNQATPPPQAPPQSDAADAKPHPLSSPLTTVIRTQ
SPACTASAGFSVTMTTTQSNPPLRGSASSAGAPPSSSSSSHAWPSSTSSSTQMNGTLDHH
SGGGVKHNPASTPTPSQTTCRLPLRKTYRENVSPRVRPGVPGGGDESLSYPRATPSPPRH
GASTPPSERTVIASVKVDRRDREALRPHTESSHDAGHLGGAGVDKMNEVFNRGIKPTQHH
HHPLLLDREGGKEDHADQEVNVRKYKRLGGKNKHMSGGTFRMDQHAPGPPSPESSFPRDS
LLPAKRCKSDSPDMDNASFSSGSPPDDSLNEHLQCAIDSILNLQQEPSGRHIKGGGSRPH
QHQSQRPGDLAASSHRPSLPPASSASSSSALAQHPQVGGRGHNGSLVPQTQSR
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctcctgttttgtttatggcgtccaaagacaccgaattcaatcaggcaaaacg
gaagtctcctgtttcctgcttgaagctgggtcctgtacagcagcccgtgcgaggctgtcc
tggagaccccgcgctgcctgcacctctatcgtctcggttgtcatggatgatgaagatggc
aggtgccttctagatgtaatttgtgacccagaagctctcaatgattttcttcatggatct
gagacccatttggacactgacgaccttttggatggttcgagtgacccctccagctcgttc
ttctctaccactgggggccatgtttcagaggtccagcctacagtgccgctgtcggtcaat
gagtcagccggcctgcccagagtcagtgttgacctggacttcctcgaggatgatgacatc
ttgggtggatccccaggaggagagggcggaagcaacgggatcgggacgaaccacgaaccg
tgcgacatcctgcagcagagcttggcagaggccaacatcacagagcagagcttacaggag
gcagaagccgagctggacctgggctccttcgggattccaggcctcacacaggtggttcag
acacttcccgatgcgagcctcaccggggcgggaggagccgccgttggcgtaggaatcggg
ggtccggcggcacttttccccgggtcggtcccgagcaccacgcctactccccccaatgcc
acggctgacatgctgggctcggtgctcgcccagcagggccttcagctccagccccaggtt
gtgaacaaggccatcagcgtccagccatttgtgcagcaggtgggcctgggaaatgtgaca
attcaacccatttcgagtctccaggctctttcaaatgggaaccagtcaggacatttgggt
atcggacagattcaggttgtgggtcagcctacagttatgactattaatcagtctgggcag
ccaatcctggcaaaggccatgggtggataccagttgcaccagtctggggctgaggtgtcc
ggtgctggttctcagtcagggcttggaggcgcaggcggcgggcttctgatccaaggtaac
aaagctactttgagttccccagctttaaatggaccggctgtgtgtgtcagcagcgccaac
agtagtggcggtaccatgacggcaccgtctgggcttgtaggatttggtagcacccctcta
agttcaggggtcacgccgcaggcacaaacccaaggaggccaaatcatgcagaacgtgatc
atccagcgcacccccacaccaattcaacctaaaccccctcagggtggagccattcagccc
aaacttttcaaacagcagccgcagcagccatcaccggtaccccagaccctccagaacgac
gcccacaagaccctcgggattcagcagctgccggtttccgctgctcagaatgtaaccttc
ctgacagggaagcccggttctaacgtggttctgagtacgcaagccacaacgcaggccccc
cagtttcaacagtctcttttcaagcagcaaggcccacagccgtcaggcaaacctcttagc
gtccacctactaaaccaaccgagcagcatcgttcttcagggtcagaaccaccagttcctc
ctgccccagctgcaggcgggcgggcagatcctgacccagcaccccggtggccacatcatc
acaagtcagggtcccggtggacagatcatcgcaaaccaaattttgactgcaaaccagaac
atcaacttgagtcaggtgctgacttcacagggcccctccggggcaacccacatcctctcc
ggacccatccagctccagtctggccaaatgggcgcacctaccctctttcagatgcccgtt
gcctcactggctcagactcaaagccagacgcagacccacaccgtctccgggggtgcgcag
acggttatacagggcatgccgatccagaaccccttgaccatgttgggtcaggtggaagga
ctgagccctgccgtcagccttcagcccgctctgcagccccagtcaggcggcgtccccagc
agcacgggagcagcaacagtaggtcaaggccagcctggagaagccgtggctgtgttggga
ggctctgccgacccggcgggtcaccccacgcagcagctgctcccacagtcctccatcctc
accttacagcaggcttcctccgtgtcctctgcttccaccgtgtcctcctcttctccgtcc
atatcggtctccaccacgtcctcctcggtcacagcagtggggctggctccccctcaagct
cagcacagtccagggaggctactattcaccaaccagggccagagtatgattctgagccag
gagtctctgcagatgttcctccagcaggagcagcgccatcacacagagaatgagtcgacc
ccctctgtgggcgtgccggcgtctgtaatcgtcagcagcaacagcatcactactgcggcc
cctgctgtccatgatagccaattagctgactcttgggtggggcggagccacagtcctccc
cctggcccctcccacatgacagcagtggtaaaggtaccttccagcgcagctcagcagcct
ctgaagatccagggcatgtccccgtcgccggcgttgaccactcatcccccgacgcccccc
gtggcggaaagcccccagccttcccagtcaccactggtcctgggccagcagatccagtcc
ccgcatcatcaacagcgccctccgtctcagccgcagccgcagtcccagaccccctcgcgc
tcctgcacgccctcgtctcacccttcgctcttcatcgtccccagtcaggtggcggagtcc
cccaaacccgccacgcaagtccagccgcagcagacgcccccccaacagcagcacatccaa
cttcagctccagcccctcccccgaccgccgtcgctgcccgccccctaccagcaagaaagg
ccttcaatgtcacagtcgcccaaacctccctccgcacccgcagcgccgcagcacccgttc
acgcccgctccggctagcgcttgtgccaccgccgtggtgaagacccagatccccgtccag
ggcttgacggcggtgcatcagcagcagctgcagctggtgggagctcaaatccagactctg
tcctccatcagccaaccctcacctcagcagaaacagctgctggagaagctgcaccaggtc
cagcagaacatcatgcttcaggccaaacctgctcctcaaacccccagtcagtttatgtcc
cagcaagacgtgcctgtcgataaaacgattgcttcatcaaccagctccgacattcccgct
cagcttcccacaatgctgcagccgacgtcggtgctcgtcaaaactcccgcttcaggtcag
ctgcaaatatcaagtgacttacaggttttctcaggagcccaagggccagcactggtgaat
cagactgtctctcctgccagccttacccagcctgcacaggttcagccaaagccaggagtg
atcagctcagtcggggggatgactctggggaaaggtggggtgaaaatccaggtgttagga
gctaccctgacccagatgcctgctccacaaccccttccagtacaaactcagacaacaaca
atgcctttcggtggagaacccagtaaagaagccaggatgctggaacagctgaggaaacat
cagggttcagtgcttcaccccaactacagtgctcctttccactcctttgaggacactctg
aacagactgctgccttaccatctctaccagggaactgccaactcctcccaagactatcag
agagtggatgatgaatttgagaaggtctcctgccagctgctaaaaaggacccaagcgatg
gttgataaatatcgccacttgctcttcgctgagtcaaaagcatttaaacctgagcagaga
ctgggcccctcggcagagatggtgatgatcgacaggatgttcatccaggaggagaagagt
gctctgacttcggacagggcttttgccaaggagaaaccagaggagtttttggcgagcgtg
cgaaagttggacagtatctctgagccgacggagcccccctcagtgagtggagtggccccg
gttgacccccctgtccaagcacctgttgctccagctgcagcgcctcctttaaacgtcacc
ccaatccctccgccggcatctgcttccgctccggttcaagctcctgctccagttcccgct
gcgactcctgcgcctcctttcccccctaccaagttggtcataaagcagggtgggggcgga
gcatctgtatcctggactaccagctgtcctccggctgctccagccaaacccgcgtctgat
cctgtcagccaaagcttcagccgtgctcccaccacctcctcatcgtcgtcatcctcctcc
tcgctcccctcaaactcccaggacgcagacgacgacgacgctctccctcagcgaaccagc
aagccgcccatcaagacctacgaggctcgcaggagaatcggtttgaagctgaagatcaag
caggatcagacgggcttcagtaaggtggtccacaacacggctctggacccggtgcacacg
ccccaacctcagctgagcaatcaggccacgcccccgcctcaggctccgccccagtctgac
gccgctgatgcaaagccccaccctttatcctcccctctcaccacggtgatcagaactcag
tcccccgcctgcacagcttccgccggcttctcggttaccatgacgaccactcagagcaac
ccccctctgagaggaagtgcttcctccgctggagccccgccctcgtcctcttcatcctct
cacgcctggccgtcgtccacctcgtcctccactcaaatgaacggcacgctggatcaccac
agtgggggcggagtcaaacacaaccccgcctccacccccaccccctcccagaccacgtgc
cgccttcccctccggaaaacctaccgggaaaacgtgagcccgcgggtcagacccggcgtc
ccgggtggaggagacgaaagtttgtcctaccccagggccaccccctcgccccccaggcac
ggggcctccacccccccctcagagcggacagtcatagccagcgtgaaggtggacagaaga
gacagggaggcgttacgcccccacacagagtccagccacgacgctggacatttagggggg
gcgggggtggacaaaatgaacgaagtgtttaaccgtggcatcaaacccacgcagcaccat
catcaccccctgctcctagacagggaggggggcaaggaagatcacgcagaccaggaggtc
aacgtacggaaatacaagcggctgggcggaaaaaacaaacacatgagcggcgggactttc
cgaatggaccagcacgcccccgggcctccctccccggagtcctccttcccccgagactct
ctgcttcctgccaaacgctgcaagtcggactcccccgacatggacaacgccagcttctcc
agcggcagcccgccggacgactcgctgaacgagcacctgcagtgcgccatcgacagcatc
ctcaacctgcagcaggagccgtccggccgccacatcaaggggggcggcagccggccccat
cagcaccaaagtcagcgcccgggggacctggctgcctcctcccacagaccctcactcccg
cccgcttcctctgcctcctcctcgtccgccttggcccagcaccctcaggtcggtgggcgt
ggccacaacggcagcctggtgccccagactcagagcagataa
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