Oryzias melastigma (Indian medaka): 112149078
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Entry
112149078 CDS
T07439
Symbol
git1
Name
(RefSeq) ARF GTPase-activating protein GIT1 isoform X1
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112149078 (git1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112149078 (git1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149078 (git1)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112149078 (git1)
Endosome - Golgi transport
Arf GTPase associated proteins
112149078 (git1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
112149078
NCBI-ProteinID:
XP_024132301
Ensembl:
ENSOMEG00000008448
LinkDB
All DBs
Position
LG13:complement(29874697..29907887)
Genome browser
AA seq
778 aa
AA seq
DB search
MSRKLQRTEVCADCSAPDPGWTSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPTL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLAFVHKL
PCRDDDGVTTKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQI
LQAELLVVYGADPGAPDINGRTPMDYARQAGHIELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRE
NDAVWLTTQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDA
KRRQQGKGLSPTDPLDLGIDDDQHDYDSVASDEDTDSELTTQNNNNTQRSNRAKSMDSSD
LSDGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEITRMQTENSVLRGCQ
QAGGAAGHGAGGGGGGGHWPGGGKQVGGGGSAGPGMDAPSLSVPPSAAPHSHPHWRERQA
YSMFEPGAVPGPTAHGPPALDSLAARLQPLNSASVRKGVTGGPGTYGGQPLSGSIEVGRY
MVPKPEKHGSGTDSDYDNTHTYDPSLSMGRSSEEEGRGESEDGGGGEGGEPDPTLPCTED
VILKTEQVTKNIQELLRAAQEFKHDSFVPCSEKIHSAVTEMASLFPKRPALDAVHCSLRL
LASSASRLQVECRKAVPSESGAPAVDYQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaagctccaaaggaccgaagtctgcgctgactgcagtgcgccagacccgggg
tggacgagtatcaacagaggggtcctgatttgtgatgaatgctgttcagtacaccgcagt
ttaggccgccatatctcaatagtcaaacacctaaggcacagcggatggcctccgacatta
ctgcagatggttcagacgctggccagtaacggagccaactccatatgggagcacagcctc
ctggaccctgcgcaggtgcagagcggtcgtaggaaaccaaaccctcaggacaaggtccat
cccactaagtcggagttcatcagagctaagtaccagatgctggcatttgtgcacaagctt
ccctgtcgtgatgatgatggggtcactaccaaggatctcagtaagcaacttcattcgagt
gtgcggactgggagcttagagacctgtcttcggcttttgtccctcggcgctcaggcaaac
ttcttccatccggagaaaggcaccaccccactccacgtggcagccaaggcggggcaaatc
ttacaagcggagctgctggtcgtgtacggcgcagatcccggagcgcctgacattaatggg
cgcacgccgatggactacgctaggcaggcgggtcacatagaattagcagaacgtctggta
gagtgtcagtatgaactgactgacagactagccttctacctgtgtggccggcgtccagat
cacaaaaatggtcattatatcattcctcaaatggcagacagagctcgtcctaagtgccca
acacagagtttggacctctcagagctagcgaaggctgccaagaagaagcttcaagcgctt
aacaatcggttgtttgaggagttggcgatggacgtctatgacgaggtggaccgcagagag
aacgatgccgtgtggttgacgacacagaaccacagcactctggtaacagaacgaagcgcc
gttccttttctgccagtcaaccccgaatactccgccacacgcaaccagggacgtcagaaa
ctggcccgattcaacgcccgggagtttgccacgctcatcatcgacattctgagcgacgcc
aaacggaggcagcagggcaagggtctgagtcctactgacccgttggacctgggcatcgat
gatgatcagcacgactacgacagtgtagcctctgatgaagatacagacagcgagctcacc
acccagaacaacaacaacacgcaacgcagcaaccgtgcaaagagcatggactcgtccgac
ttgtccgacggccccatcaccctgcaggagtacctggaggtgaagaaagctctggcctcc
tcagaagccaaggtgcaacagctgatgaaggtcaacaacaacttgagcgaggagctccgg
cgccttcagaaggagattacccggatgcagacagagaacagtgtgctgcgggggtgccag
caggctgggggggcagctggccatggggcaggaggaggtggagggggaggacactggccg
gggggtggaaagcaagtgggcggaggaggctctgccgggccggggatggacgccccatcg
ctctccgtgcccccctcggccgcccctcactcccacccccactggagggagcgccaggcc
tactccatgttcgagccaggggccgttcccggccccacggcccatggccccccagccctg
gactccctggcagcccgcctgcagcccctcaactcagctagcgtgagaaaaggtgtcacg
gggggtccaggcacctatggaggccaacctctgtccggttccatagaggtgggcagatac
atggtgcctaaaccagagaagcatggcagtggcaccgacagcgactacgacaacacgcac
acgtacgacccatcattaagtatgggtcgcagcagtgaggaagaaggtcgcggtgagtct
gaggacggagggggtggggaggggggagagccggaccccaccctgccctgcactgaggat
gtcatactgaagaccgagcaggtgaccaagaacatccaggagctcctccgagcggcacag
gagttcaaacacgacagttttgtcccgtgttctgagaagatccactctgcagtcacggag
atggcctccctctttcctaaacggccggctctggatgcggtccactgctcgctgcgcctg
ctggcctccagcgcctcgcggctgcaggtggagtgtcgcaaggcggtgccgtcggagtcc
ggcgcgccggcggtggactaccagctcctcacgcagcaggtcatccagtgcgcctacgac
atagccaaggccgccaagcagctggtcaccatcaccacccgggagaagaagcagtga
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integrated database retrieval system
