Oryzias melastigma (Indian medaka): 112149087
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Entry
112149087 CDS
T07439
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1
KO
K03260
translation initiation factor 4G
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112149087
03012 Translation factors [BR:
oml03012
]
112149087
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112149087
mRNA cycle factors
Stress granule specific factors
112149087
Translation factors [BR:
oml03012
]
Eukaryotic type
Initiation factors
eIF-4
112149087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
112149087
NCBI-ProteinID:
XP_024132316
Ensembl:
ENSOMEG00000019681
LinkDB
All DBs
Position
LG13:20111793..20139315
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AA seq
1711 aa
AA seq
DB search
MNKAPHPLTGPLSAPHPAPSPGLSQSPFPPGQPPSVLFAPSPQPQMNPTPQPRQFAPGPR
PLHQQGSFRSLQPFYTSRTGLAPSAGPRGVPPSSAPRPVTPTHVYQAGPGSQMMMIPQQQ
LSFPSSPQGAAFFIPGQYRSAAYMTTPQQYQVPAGTPGFYPGTSPAEYGTFGAFYPAQPQ
FPASVQAGPVIMNPAPQQQQPPQPPQHISTKRERKQIRIRDPNRGGQDITEEIMSGGRSG
STPTPPQTAVSASERTALPQANGESLAAAATPALVPPDDRGKPAPPPLSHTPELDKSGPT
PKEATSCDANTKAPAALLLETPNSSLNTVSTFGPILPLSDNMDASPAKREPTPTPLSAPE
VPAYPAPLPDPVPTSSIETETDETDEERKEEDLKETEAEETLSSLDPHGDPTSGTNGVEE
VEPERLSVVVPTCHLEDSLESPIVQPEELCLPNGLPLPAPQDPEALAVNTAERDDSPIAE
PEVIQPPPTQTSLQTSAAVAETPSAPTVQPTPVTVDQLPSPPAAEESPVETDSQATPAPP
EDHDAAPEEPLDAQEDVSVPQSSVKEEMTPPSEAVSLPEISQETLPTVPTPPEEEREDTP
PLPLTVTPALVEMSMQAAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVVPPEPAPAPP
PKAQPPAASPAAPEDPDLTWEDKEDKLDAENIQPDSPTSNDSDMKYQYKEEQWMPINMEE
KKKYDREFLLGFQFISASMNRPEGLPAISDVVLDKANKAPLRQLDPSRLPGMNCGPDFTP
SFANLGRPSMGGGNRGPPPGMSIGVGGPRRSQQMQRKIFITMASNEDVQLNKAEKAWKPS
VKKVTRTRAAEDIDENDPENIKTQELFKRVRSILNKLTPQKFQQLMKQVMELTIDTEERL
KGVIDLTFEKAISEPDFSVAYANMCRCLSGLKVQTTDKPGATANFRKLLLNRCQKEFEKD
KDDDEIFEKKQKELEAASGGEEKQRLMEELEDAKDKARRRSLGNIKFIGELFKLKMLTEV
IMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFNQMEKIIKERKTTSR
IRFMLQDVLDLRRNNWVPRRGDQGPKTIDQIHKEAELEEHREQMKVHQALISKKDTPGGP
GGRMGGGGGPGRGGPHTPGRGAPPQDEGWNTVPISKNRPIDTSRLSKITKTPVLDFNNQL
LAPGGKGSWGSWGKGSSGGTIAKPADSGAESGSRPATSTLNRFSALQPAPINSGFSAESE
RRVPQRNSSSRERGDRFDRRDERDRNRLQVTKRSFSREKEERGSANHLPRMQSASDPRGS
TNRAKSRDNVKRETAATPPPPQTPTEPTLTEEELEKKSTAIIEEYLHINDMKEALQCVQE
MNSPQLLFVFVRNGLESTLERSAIAREHMGLLLHQLLKSGILSTPQYYKGLQEILEVAED
MAIDIPHIFLYLAELITPMLQEGGIPMGELFREIAKPLIPLGKAGLLLVHILTLLCKGMS
HKNAGAMWREADLRWTELLPEDVDVNKFVTENNVGFTLGDESEKSGPKEMSATELTKQLD
RLIQGRADNQKIFDWVEANLDEQQTSSSMFIRVLMTCVCQSAIICENPYKVDGDQIKLRA
KLLQRYLKDEQKELQALFALQALMVQMEQPANLLRMFFDTLYDEDVIKEEAFYKWESSKD
LAEQQGKGVALKSVTAFFTWLREAEEESDNS
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacatcctcttacgggacccctctctgccccccaccctgccccctcc
cccggtctttcacagtcaccttttccccctgggcaacccccttctgttctgtttgcaccc
tccccacagccacaaatgaaccccacacctcagccccgacagtttgcaccagggcctcga
cctttacaccaacagggaagcttcaggtctctgcagcccttctacaccagtaggaccggg
ctcgctcccagcgccggccctcgtggcgtaccccccagcagtgctccccggcccgtgact
cccacccatgtgtaccaagcaggccccggctcccaaatgatgatgattccccagcaacaa
ctgtccttccccagctcacctcagggtgcggccttcttcatacctgggcagtaccggtca
gcagcttatatgacaacaccccagcagtaccaggtcccagcaggaaccccaggcttctac
cctggaaccagccctgctgaatatggtacttttggggcgttttaccccgctcagccccag
ttccccgcctccgttcaggctggaccggtgatcatgaacccagctcctcaacagcagcaa
ccaccacagcccccccagcacatctccaccaaacgggaacgcaaacagatcagaataaga
gaccctaaccgaggaggccaagacatcacagaggagattatgtcaggggggcggagtggc
tctactccaacccctcctcagacggccgtatctgcatcagagaggaccgcgctgccccag
gctaacggtgagagcctcgcagctgctgcgacacccgcactggttccaccagatgacaga
gggaaacctgccccgcctcctctgtcacacacccctgagcttgataagagtggccccacc
cccaaagaggccacctcctgtgacgcaaacacaaaggctccagcagcgctgcttttagaa
accccaaactcatctcttaacacggtttccacttttggacctattttaccgctctcagac
aacatggatgcctcccccgctaaaagagaacccaccccaacccctctgtcagcacctgag
gtacctgcgtaccctgcccctctccctgacccggtccccacctcctccatagaaacagaa
acagacgagacggatgaagagagaaaagaggaagacctcaaagagactgaagctgaggaa
actctaagctctctggacccacacggtgatccgacctctggcactaatggagtggaggag
gtggagccagagcgcttgtcagtcgtggtacctacttgtcatctagaagactcgctggag
tctcccatcgttcagccagaggagctctgtctgcccaatgggctgcctctcccagcccct
caggatcccgaggctctcgccgtgaacaccgcggagcgtgacgacagccccatcgctgag
cccgaggtcatccagccgccgccaacgcagacttctctgcagacctctgcagctgtggct
gagacaccatctgcaccaactgtccagccaacacctgtaacggttgaccagctgccatct
ccacccgctgcggaggaaagtcccgtagaaacggattcacaggctacacctgctccgccc
gaggaccacgacgctgcgccggaggagcctctggatgctcaggaagatgtttcagtgcct
cagtccagtgttaaagaagagatgacacccccttccgaggccgtctccttacctgaaatc
tcgcaggaaactctgcccaccgtgcccactccccccgaagaggagagagaagacactcct
cctcttcctctcaccgtcacccccgccctggtagaaatgtctatgcaagctgctgtgtca
gtgccaaagaagaaaaggaaaatgaaggacctcaacaagaaagaggcagttggagatctc
ttggatgcctttaaggaggagcaggtagttgtccccccagagccggcccctgccccccca
ccaaaggcccagcctcctgccgcgtctcctgcagccccagaggacccagacctgacctgg
gaggataaggaggacaaactggacgctgagaacattcagcccgattctcctacgtccaac
gactctgacatgaagtaccagtacaaagaggaacaatggatgccaataaacatggaagag
aagaagaaatacgaccgggagtttctcctgggcttccagttcatctctgcaagcatgaac
agacctgagggtttaccagccatcagtgacgtcgtcctggacaaggcaaacaaagctcct
ctgcgtcagctggaccccagtcgtctgccagggatgaactgtgggccggacttcactcca
tcttttgccaacctcggcaggcctagcatgggaggaggaaacagaggaccacctccaggt
atgagcattggagtcggtggtccccgtcgctcccagcagatgcagaggaagattttcatc
accatggcctccaacgaagacgtgcagctcaacaaggcagagaaggcctggaaaccgtct
gtgaagaaagtcactcgcacccgcgcggccgaggacatagacgagaacgacccagagaac
attaagacccaggagctgttcaagcgggtccgcagtatcctcaacaaactcaccccccag
aagttccagcagctcatgaaacaggtgatggagctgaccatcgacacggaggagaggctg
aaaggggtcattgacctcaccttcgagaaggccatctcggagccggacttctcagtggct
tacgcaaacatgtgccgctgtctttcagggcttaaagtccaaaccacagataagccagga
gccactgcaaacttccgcaagctgctgctaaatcgatgccagaaggagtttgagaaggat
aaagatgacgatgagatctttgagaagaagcagaaggagctggaagctgcatcagggggg
gaggagaagcagcggcttatggaggaactagaagatgccaaagacaaggccaggaggcgc
tcactgggaaacatcaagttcatcggggagctgttcaagctcaaaatgctcacagaggtc
atcatgcacgactgcatcgtaaagctcctcaaaaaccatgacgaggagtccctggagtgc
ctctgcagactcttgtccactattggcaaggacctggactttgagaaggccaagcctcgt
atggaccagtatttcaatcagatggagaaaatcataaaggaaaggaagacgacctccagg
atccgcttcatgttacaagatgttctggacctccgacggaacaactgggtaccgcggcgg
ggggatcaaggccccaaaactatcgaccagatccacaaagaggctgagctggaggagcac
cgggagcagatgaaggtgcaccaagccctcatttccaagaaggacacccctggaggtccc
ggaggcaggatgggtggagggggaggtcctggccgggggggccctcacaccccaggccgt
ggggctcctcctcaggatgagggctggaacacggtgcccatttccaagaaccggcctatc
gacacctctcgccttagtaaaatcacaaagactcctgttctggacttcaacaaccagctg
cttgctccaggagggaaaggctcatgggggagctggggtaaaggcagcagcgggggcacc
attgccaaacctgcagattctggcgcagagtcagggagccgccccgcaaccagcaccctg
aacagattctccgccttacagccagctcccattaattcaggcttttctgcggagtcggag
cgcagagttcctcagaggaacagctcgagccgagagagaggcgaccgcttcgaccggcga
gacgagcgggatcgaaacagactgcaggtcaccaaacgcagcttcagccgagagaaggag
gagcggggctcggccaaccaccttcccagaatgcagagcgcctcggaccccagagggagc
accaacagagcaaaaagcagagacaacgtgaagcgggagacagctgcaacccccccgccc
ccccagacccccaccgagccgaccttgacagaagaagagttggagaagaagtctacagcc
atcattgaggagtacctccacattaacgacatgaaggaggccctgcagtgcgtgcaggag
atgaacagccctcagctgctctttgtgtttgtgcgaaacgggctggagtccacgctggag
cgcagcgccatcgccagggagcacatgggcctgctgctgcaccagctcctgaagagcggt
atcctctcaacgccgcagtactacaaagggcttcaggagattctggaggtggctgaagac
atggcaatagacatcccacacatcttcctgtacctggctgagctcatcactcccatgctg
caggaggggggcatccccatgggagagctgttcagggagatcgctaagcctttgatccct
ctgggcaaggctggactgctgctggtccacatcctgaccttactctgcaagggaatgagc
cataaaaacgcgggcgcaatgtggagagaggcggatctccggtggacagagcttcttcct
gaagacgtagacgtcaacaagtttgttaccgaaaataacgtggggttcacgttgggcgac
gagtcagagaagagtggaccgaaggagatgagcgccaccgagctgaccaaacagctggac
agactgatccagggcagagcggacaaccagaagatctttgactgggtggaggccaacctg
gacgagcagcagacgtcctccagcatgttcatcagagtcctgatgacctgcgtctgtcag
tcagcaatcatctgtgagaacccgtacaaggtggatggcgatcagatcaagctgagggcc
aagctgctgcagagatacctgaaggatgagcagaaggagctgcaggcgctgttcgccctg
caggccctgatggttcagatggagcagcccgccaatctgctgcggatgttcttcgacacc
ctttacgacgaggacgtgatcaaagaggaggccttctacaagtgggagtccagcaaggac
ctggctgagcagcagggcaaaggcgtggccctgaagtccgtcaccgccttcttcacgtgg
ctccgggaggccgaggaagagtcggacaacagctag
DBGET
integrated database retrieval system
