Oryzias melastigma (Indian medaka): 112149115
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Entry
112149115 CDS
T07439
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112149115
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
DSCAM family
112149115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
fn3_2
C2-set_3
Interfer-bind
RIFIN
Protocadherin
DUF6377
TMEM154
DUF4446
EphA2_TM
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
112149115
NCBI-ProteinID:
XP_024132344
Ensembl:
ENSOMEG00000005263
LinkDB
All DBs
Position
LG13:complement(32400100..32547887)
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AA seq
2075 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAIRGSVAVFKCIIPASVEAYVSVVSWEKDTVSLSSGQRYLITSTGA
LYIVDVLPEDGLNNYRCTTRHRYTGETRQSNSARLMVSESTAAEPAILDGFDHREVMINH
RVELPCKAFGYPTPKYRWLKDNSPLEPDSRFRQTISGLLIESTQPSDSGTYVCEMWNTYG
NAEVVGHLYIKQPLKVVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIMEGMSKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVSP
NEPVFLVCNVKGTPPPRCTWTLDDDPVIKDSHHHLGHYETHEAHVVSQLNVTHTQVQDGG
VYRCTCSNSAGVVYHQARINVRGRASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQVDAGEYTCKVMVQPNKMDSQSVHVCVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRAIPASLGVTVDNIDFTSSLRISNLTP
DHNGNYTCIARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPILLNSVSRIQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVISTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPVVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MIAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLDSNSPQSIKVSWKPPLKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDTTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVIKTLEDVPSRPPENVLAVTKSPEIISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTNQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQLYVRTKEDVPGPPAGVKAA
ASSSSAVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDAYFYRIPNLARNRQYS
IWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVVPCKAVGEPLPTIK
WLKGNTNGTPTPVAVDGRRSLHSNGSFIIRTVKAEDSGNYSCVATNTWGSDEVTLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHELFTSINSTRARLNLA
GWNNGGCPITSFILEYRAVDSPTWTTAQRTSLTKSYILYDLQDATWYELQMKVTNSAGSA
EKRITFATLTIEGSTIPPLLNTGDPIADNMSDSGSLKIMVTIISILVVVVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHPTA
RRTAKAGPATARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPS
QDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGT
NDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFL
LNRGVPLPARGGGVSSATGSSSSVGGGGGAAGTSGSGAGATGETRGGGGAMGQACLEPQR
SRTLKRPPPMEPTPMEVPSPRDVQQWQPGTASTLPHRDIRERGEARGEVRGDAPSSGDLT
QAQAAKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatctttttccagagcatcttgaatgttttcagtgaagatcta
cattccagtctatactttgtcaatgcatctctgcaagaggtagtatttgccagcaccaca
gggacctcggttccctgtcctgctgggggtgcgccgcctgcctcgctgcggtggtatctg
gccactggggaggagatctacgatgtaccgggcatccgccacgtccaccccaacggaacc
ctccaaatcttcaacttcctgccatccagcttcagcaagctgatccatgacaacacatat
tactgcactgccgagaacccttctggcaagatcaggagccaggatgtccacatcaaagcc
gtttctcgggagccctacacagtcagggtggctgaccagaaggctattagaggcagtgtg
gctgtcttcaagtgcattatccctgcttctgtggaggcctacgtcagcgtcgtatcatgg
gagaaagacactgtttcactcagctcaggacaaagatatctcatcacatccacaggagcc
ttgtacattgtggacgtcctacctgaggatggcctgaacaactatcgctgcacaactcga
caccggtacactggtgagactcgccagagcaacagtgcgcgtctcatggtatcagagtcc
accgctgctgagccagccatcctggatggctttgaccacagagaggtgatgattaatcat
cgggtggagctgccctgtaaggccttcggctacccaacacccaaataccgctggctgaag
gacaacagccctctggagccagacagtcgctttcgccagactatctcagggttgctgata
gagagcacacagcccagtgattcaggaacgtacgtttgtgaaatgtggaacacctacggg
aatgccgaggtcgtgggacacctgtacatcaaacagcccttaaaagtagtggtcagtccc
cgaaaggtaaagggcagcgtgggtagcaaggtgtctctgtcctgcagcgtcagcggctca
gacgagtatgagctctcctggtaccgcaacggagaaatcatctaccctggcaacaacgtt
cgcttcactgggctcaatcgggagaaccttatcatggagggaatgtccaaaagtgatggc
ggagcgtaccagtgcttcgccaggaagggcaaaatgtccgcacaagactttgtgcaggtc
attcttgaagatggcactcccaaaatcttgtcctccttcagcgagaaggtggtgagcccc
aacgagcccgtcttcctggtctgcaacgtcaaaggcacgcctcctcccagatgcacctgg
acgctggacgacgaccccgtcatcaaagacagccaccaccacctgggccactacgagacg
cacgaagcccacgtggtcagccagctcaatgtcacgcacacccaggtgcaggacggcggg
gtgtaccggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgaataaac
gtaagaggccgcgccagcatccgtccaatgaaaaacatcacggctatagctgggcgggat
gccttcgtgcactgccgtgtgatcggatacccctactactccataaagtggtacaagaac
tctgcactgctgcccttcaaccacagacagcgggccttcgagaacaacggcacgctgaag
ctgagcaacgtgcagcaggtggatgctggcgagtacacctgtaaggtgatggttcagccc
aacaagatggactcccaaagcgtccacgtttgtgtgagagtgcctccctacatccaacct
tttgagtttcagcgtttcaccatcggtcagcgtgtctttataccatgcgtggtcatgtcc
ggagatcgaccgctggacatcacgtggcagaaagacggacgcgccatcccagccagcctc
ggcgtgactgtcgacaacatcgacttcacgagctcgctgcggatctccaacctgacacct
gaccacaatggaaactacacctgcatcgctcggaatgaagctgcggtcgtggagcaccag
agtcagctcatcgttagagttcctcctcagtttgtggtgcagcctgaggatcaagatggg
atctatgggaaaactgtgactctgaactgctctgctgagggctatccaccacccaccatt
gtttgggagcactccaaaggtgcaggtgtaccccagtttcagcccatccttctgaacagt
gtctctcgcatccagctactgagcaatggctcgctgctgatcaaacacgtgctggaggac
gacagcggcttctacctgtgtaaggtcagcaacgacgttggagccgatgtcagcaagtcc
atgtacctcaccgtcaaaatcccagccatgatcacctcctaccctaacaccactctggcc
acgcagggagaggagaagaggatgagctgcatcgctcacggggagaaacccatcatggtg
cgctgggagaaagaagagcgcatcatcaaccccgagaccagccgatacgtggtcactgta
aaggaagtggccgacgaagtcatctccacgctggtgattatgccaacagtccgtgaggac
tctggcttcttctcctgtcatgccatcaactcctttggtgaggacagaggcatcatccag
ctgacagtgcaagaaccccctgatcctccggtggtagagatccgcgaggtcaaagaccga
accatagcgctgcgctggaccatgggcttcgatggcaacagcccaatcacagggtatgat
atcgagtgcaagaacaaatcagcttcatggctatctgctcaagtaaccaaagacgtgtca
ccacagttaaaccaggcaactattattgacctccatccttcctccacttacaacatccgc
atgattgccaagaacatcattggcaacagcaaccccagcaacgagctcaccatcaccaca
gatgaagcagctccagacgggcctccacaagatgtcactctggactccaactcccctcag
agcatcaaagtctcctggaagccgccccttaagcacctgcaaaacggtgtaatacgcggc
taccaggtcgggtacagggagtacagccctggtggaagccaccagtttaccattatcagt
gtggacacaacaggagacaccacagagagcattgttttggacaacctgaagaagttcacc
cagtacagcgtggtggttcaggcggcgaacagagccggcaccgggccatcctcacagcaa
gtggtcatcaagaccctggaagatgtgccgtctcgtcccccggaaaatgtcctggctgtg
accaagtctccagagatcatctccctgtcctggatgcctcttcccagagaagctctcaac
ggaaatctgcagggttatcgagtcatctactgggccaaccttcctgatggagaactgggt
gaaatcagaaacgtgaccaccaatcagccgtctctggagttggacggtttggagaagtac
accaactacagcatccaggtcttagccttcacaaacgctggggacggagtccgcagcgaa
cagctctacgttcgcaccaaagaggatgttcctggtcctcctgctggagtgaaggctgca
gcctccagcagctctgccgtgtttgtctcctggctccctcccctcaaactcaacggcatc
atcaggaaatacatcgtcttctgctccaacctgcatcccatggtgatgagtgagttcgag
gcgtctccagatgcgtatttctacaggatcccaaacttggctcgaaaccggcagtacagt
atttgggttgtggctgtgacggctgcaggtcacggcaacaacagtgagaagatcacagtg
gagccgctggccaaagctccagccaggatcttgaccttcaatggcaccgtcaccactccc
tggatgaaggacatcgtagtaccatgtaaagctgttggtgagcctcttcccaccatcaag
tggctcaagggaaacaccaacgggacccccacgcctgtcgcagtggacggccgccgtagc
ctccacagtaatggaagcttcatcattcgtacagtgaaagcagaggattctgggaattac
agctgtgtggccaccaacacctgggggtcagacgaggtcacactcaacctgcaggtccaa
gtccctcctgaccagccccggctcacggttaccaagacgaccaccacatcaatcacactc
tcatggatacctggagacaacggaggaagctccatcagaggttacatcctgcagtactct
gaggacaacagtgagcagtggggcagttttcccatcagccctagtgagcgctcttatcgt
ctggagaacttgaagtgcggaacatggtacaaattcacactgaccgcacaaaacgctgtg
gggccaggacgcatcagtgagatcattgaagcaaagactcatgggaaagagcctcagttt
gccaaagaacacgaactctttaccagcatcaactccaccagagcgcggctcaacctggca
ggctggaacaacggcggctgtcccatcacctccttcatcctggagtacagagccgtggac
tcgcccacctggaccacggctcagcgcacgtctctcaccaagagctacatcctgtacgac
ctgcaggacgcgacgtggtacgagctgcagatgaaggtcacaaacagtgccggctcagca
gaaaaacggatcaccttcgccactctgaccattgaaggaagcaccattcctcccttactg
aatacaggagaccccatcgcagataacatgtcagacagtggaagtctgaagataatggtg
accatcatctccatcctggtggtggttgtgctggtcttcatcatgctgatggtgctgaag
aggaggaggagggaacaaaggctgaagagactcagagatgccaaaagcctggcagaaatg
ctgatgagtaagaacactcgaacccccgacacagtgaacaagcagcagcagacgttacga
atgcacatcgatatccccagagcccagctcctgatcgaggagagggacaccatggagaca
atcgatgacaggtcaactgtgctgttgacagataatgactttggagagaccaataagcag
aagtcttccacggtgacccacacagttcactatcagtctctgtctcaagccaccggccca
ctggtggacgtgtccgatgccaggcctggaaccagtgagtcccaccaccaccccactgcc
agacgcactgccaaagctggtcctgccacggcgcggagccgctatgccagccagtggact
ctgaaccggccgcatcccaccagctcctcacacaccctgaccaccgactggagactcccc
accccacgagccaccggatctgtggacaaagagagtgacagctacagcgtcagcccatca
caagacacagatcgtgcacggagcagtatggtgtcaacagagagcgcatcctccacctac
gaggagctggccagggcgtacgagcacgccaagatggaggagcagctccgccacgccaag
ttcaccatcaccgagtgcttcatctccgacacctcatcagagcagatgaccgcagggacc
aacgattacactgacagcctgacctccagcacgccgtctgagtcaggcatctgtcgcttt
accgcttccccgcccaaacctcaggacgtcagcagggtcatgaacatggcggttcccaag
gcacacaggccaggtggggagttggtccatttgccgccctacctccgcatggacttcctg
ttgaaccgcggcgtgcctctcccagcccgaggaggcggggtcagtagcgccactggcagc
agcagcagtgtaggaggtggcggaggggcggcaggaacgagcgggagtggcgctggtgct
acgggagaaacgagaggaggcggaggagccatgggccaggcctgcctggagccccagaga
agccgtaccctgaagaggccacctcccatggagcccaccccaatggaagtgccctctcct
cgggacgtgcagcagtggcagccaggaactgcctccaccctcccgcacagggatatccgg
gagaggggagaggcccggggtgaggttcggggagacgccccctcctcgggagatctaacc
caagcacaggctgccaagctcagcacctcccaggagtcactcctggactccagaggacac
ctgaaacagagcaacaacccttatgccaagtcttacactctggtataa
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integrated database retrieval system
