Oryzias melastigma (Indian medaka): 112149128
Help
Entry
112149128 CDS
T07439
Symbol
gdpd5b
Name
(RefSeq) glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1
KO
K28873
glycerophosphocholine phosphodiesterase [EC:
3.1.4.2
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112149128 (gdpd5b)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
112149128 (gdpd5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
Motif
Other DBs
NCBI-GeneID:
112149128
NCBI-ProteinID:
XP_024132375
Ensembl:
ENSOMEG00000006379
LinkDB
All DBs
Position
LG13:complement(30722716..30771636)
Genome browser
AA seq
589 aa
AA seq
DB search
MVKHQPLQVYERQLCLSCITGLYGCRWKRYQRSHDDTTKWELLWSFILLFTFCLLLVWFY
FWWEAHNDYNEFNWLLYNRSGEWSDGTVPILATTAAGVIYVAFLMILALCHIALGQQLNL
HWLHKIGVVAALLTTVVGVISVNQTWEQEWEIVPISLQATGPFLHIGALAAVTALSWIVA
GQVARAEKPVFQVVVMLLYLSVLLGLYVVPLYITSPCIMDPSTLKPRPEVIGQRGAPMIA
PENTIWSFQRSLQMNVTGLETNVKISADGVPFLMHDFDLRRTTDVEKVFPERRTLNASSF
NWTDLQQLNAGEWFLKDDPFWTVPSLSPSERRRIANQSVCSLEELLKLASITNSSVVFRL
QRPPPDHPHHHSWINDTLTVVQQSGIPQRLVMWTTDEQRAEVRRQAPGLIQTSLVKCSLQ
SLQQSDVSRMLLRYNQVSTNEVRNFSQSHIDLTLYTVNDPWLYSVLWCSGVSAVSSEAPQ
VLKKVPYPSWLMRPNEYCLMWVSADLISFAVIVGIFVLQNYHIIRYRMSGMRSYNPEQIM
LSASVRTASRDVNVMKEKLIFSEVGSEMGADEEPYMDGYNYYSNQSIRQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacaccaacctctccaggtctacgaacgccagctgtgtttgtcatgtatcacc
gggctctacggttgccgatggaaacgctatcagcgttcccatgatgacaccaccaagtgg
gagctcctgtggtctttcatcctcctcttcaccttctgtctgctcctggtctggttctac
ttttggtgggaggcacataatgactacaatgagtttaactggcttttatacaaccgctct
ggggagtggagcgacggcactgttcccatcctggccaccactgctgcaggcgtcatctat
gttgcatttttaatgattttagcactttgccacatagcacttggtcagcagctgaatttg
cactggctccacaagataggagtggttgctgctctgctcaccaccgttgtcggggtgatt
tctgtcaaccaaacatgggagcaagagtgggaaattgttcccatctccctgcaggctaca
ggtccgtttttgcacataggcgctctcgctgcagtcactgctctctcgtggatcgtggca
ggacaagtggctcgagccgaaaaaccagtgttccaggtggtggtcatgctgctatacctc
agtgtgttactaggactctatgtggtgcctttgtatattacctccccatgtatcatggac
cctagtaccctgaagccccgccctgaggttatcggccagcggggagcccccatgattgct
ccagaaaacacaatctggtctttccagcgatctctgcagatgaacgtcacaggattggaa
accaatgttaaaattagcgctgatggcgtgcctttcctaatgcacgattttgacctccgg
aggaccacagacgtggaaaaggtttttccagagagacgaacactcaacgcatcatctttc
aactggaccgatctccagcagctcaatgctggggagtggttcctcaaggacgaccccttc
tggacggttcccagcctgtccccgtctgagaggaggaggatcgccaaccagagtgtttgc
agcctggaggaactcctaaagctggcctccattaccaacagctctgtggttttccgactg
cagaggcctcctccggatcacccccatcaccacagctggatcaatgatacactgacagtg
gtgcagcagtctgggatacctcaacgcctggtgatgtggactactgatgagcaaagggct
gaagtgaggcggcaagcgcccggcctgatccagacatcactggtgaaatgcagtcttcaa
agtctgcagcagtctgacgtcagcaggatgctgctgagatacaaccaagtcagcacaaat
gaagtcaggaacttctcccagtctcacattgacctcaccctctacaccgtcaatgatcca
tggctgtactcggtgctctggtgcagcggagtgtccgcagtctcctctgaggccccgcag
gtcctcaaaaaggtgccttacccaagctggctcatgagaccaaatgaatactgcctgatg
tgggtgtctgcagacctcatctccttcgccgttattgtaggaatatttgttctccagaac
tatcacataatcaggtatcggatgagcggcatgcgcagctacaaccccgagcagatcatg
ctgagcgcctcagtcaggacggccagccgagacgtcaacgtcatgaaggagaaactcatc
ttctctgaggtggggagcgaaatgggagctgatgaggagccgtacatggatggctacaac
tactactccaaccagagcatccgtcagtga
DBGET
integrated database retrieval system
