KEGG   Oryzias melastigma (Indian medaka): 112149161
Entry
112149161         CDS       T07439                                 
Symbol
tubd1
Name
(RefSeq) tubulin delta chain
  KO
K10390  tubulin delta
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    112149161 (tubd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112149161 (tubd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112149161 (tubd1)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112149161 (tubd1)
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112149161 (tubd1)
SSDB
Motif
Pfam: Tubulin Tubulin_2
Other DBs
NCBI-GeneID: 112149161
NCBI-ProteinID: XP_024132429
Ensembl: ENSOMEG00000005007
UniProt: A0A3B3BFW5
LinkDB
Position
LG19:complement(16728018..16734568)
AA seq 469 aa
MRFSKLKETTFSAELECSCVLFGPVMSVVTVQLGQCGNQVGQELFDVLCSDALAGQRKTY
STASCERFFHQTAQGELEARAVLIDMEPKAINSSRTKALRGGRWRYGEDSHFSQKQGSGN
NWANGFCIHGPHHKDAVEELVRREVERCDRLAGLMTMMSVAGGTGSGVGTYITQCLRDIY
PSSFVLNHLTWPFGTGEVILQNYNSVLTLAHLYQLSDAIVVHENDTVHRICSRLLNIKPI
AFTDINRVIAHQLGGVLQPALTPDSNGVYSLNPIGELVSALCCHPEYKLLSVSTIPQMPS
SSVPYSSFSWTGLLKHLRQMLISNTKMEEGIDWHVRPPPASGRIRSAAGSSFNTSLANLL
VLRGKDVYSAETGSFEDATIYTPWLSPAEAFSAWKSPTPFNKYEKSATLVSNSQALLGPL
DDIVRKAWNMFASRAYIHQYDAFGISEENFLDSFTALEQVISSYRELQS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcgcttttcaaaactgaaggaaactactttctcagcggagcttgagtgcagttgtgtt
ctgtttggacccgtcatgtccgtggtgaccgtccagctcggtcagtgtgggaaccaagtg
ggtcaggagctgtttgacgtgctctgcagcgatgcgctggcgggacagaggaaaacgtac
agcacggccagctgtgagaggttcttccatcaaactgcacagggagagctggaagccagg
gccgtgctaattgatatggagcccaaagccatcaactccagtaggaccaaggctctgaga
ggtggcaggtggaggtatggagaagattcccactttagccagaagcagggatctggaaac
aactgggctaatggattttgcatccatggtcctcatcacaaagatgcagtggaggagctg
gtgaggcgggaggtggagcgctgtgacagactggcgggtctcatgaccatgatgagcgtg
gcaggtggaaccggctcaggcgttggcacctacatcactcagtgcctcagagatatttac
ccatcatcctttgtcctcaaccacctcacatggccgtttgggacaggggaggtgatcctc
cagaattataactcggtgctgacgttggctcatctctaccagctgtctgacgccatcgtg
gtgcacgagaacgacacagtccacaggatctgcagtcggctgctcaacatcaaaccaatc
gccttcactgacatcaacagagtcattgctcatcagctgggtggcgtcctgcagccggcc
ttaacccctgactccaacggagtctacagcctgaatcctattggagagttggtgagcgct
ctttgttgtcacccggagtacaaactgctcagtgtttccaccatccctcagatgcccagc
tcctccgttccctacagctccttcagctggacgggtctgctcaaacacctccgacagatg
ctcatctccaacaccaagatggaggaaggcatagattggcatgtgcgtccacctccagct
tctgggcggatcaggagtgctgctggaagcagcttcaacacctcgctggctaacctgctg
gtgttgagagggaaggacgtctacagcgcagagacgggaagcttcgaagatgcaacgatc
tacaccccttggctctcaccagcagaagctttcagcgcctggaaatcccccactcccttt
aataagtatgagaagtccgccacactggtcagtaacagtcaggctctgctcggacccttg
gatgacatcgtgagaaaagcctggaacatgtttgcctccagggcttacatccatcagtat
gatgcatttgggatctctgaggaaaattttcttgacagctttacagctcttgagcaagtc
atctccagctaccgtgaactacagagctag

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