Oryzias melastigma (Indian medaka): 112149178
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Entry
112149178 CDS
T07439
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X3
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112149178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149178
Membrane trafficking [BR:
oml04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112149178
Endosome - Golgi transport
Arf GTPase associated proteins
112149178
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112149178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
SAM_2
RA
PH_11
PH_6
PH_8
Motif
Other DBs
NCBI-GeneID:
112149178
NCBI-ProteinID:
XP_024132463
LinkDB
All DBs
Position
LG13:22637781..22701233
Genome browser
AA seq
1583 aa
AA seq
DB search
MCQSESSATVLDWLGVIRLEQYTDLFLSAGLKTIQECQHLTPNQLERMGITLPGHQRRIL
ASLNKTQITQETAPVPPERDQQTWRPQPVPREVKPESDGETRIPVPKMRDKPIPKERQVY
KMQENCKEQGEETGLAQKNTALGEGEQEDGNGELDKDQPKPQPRERTKFRSSAPVDSSSP
TNLPPVPPRITINFPPQCFTNSLAPSQPAPGPVSPRLDKPPLEQCRSLPGRSTPLFSGNS
SEVFPESLSIQSTPARPRTLNIQPPEPSAFLNSDGGDKASPISPTTNNMINAPPLPPKAG
VGPKSPPPLPQRLLAQSPTQSPAPSKTGTDEIPRNQPPQIPLRSKTPQIQENCTLPPQAD
LQPAVPSRRVPQPPSPLIFSSPDHHPLPGSDSDDNTSDEYERPDFLCSVLQENMADEKSR
LQVSSDFCSDDEMLDDDDYHSLWQDGQDSMKGSLYLPHNMSMREDISQQSTVIKQGWLSK
NPPQGALYYQRRWVRLDSDYLRYFDIEKAVYSKGIISTAFITKVTAVGDLKLEVVTSNRT
FIFKAESEDDRNEWVNALEECTRGRRRSSVPSPSLMSDLQGYLELRGLRSKLYTVIVSDK
VFLYKNIDDYHIGVGITSIEMNVGSVKETDRRSFDLITPYRIFSFTAESEQLKDQWVDAM
RNAIGLALSTSEIAERIWAEPSNSSCADCAAPKPEWAAINLCVVICKRCAGEHRGLGPSI
SKVRSLKMDKKVWTEELIQVFLLLGNERVNSFWAANVPPSEALTPSSCSEDRRRYICNKY
RQGKYRKYHPLYGNQQELNDALCINVQCSDVLETLSLIFCGADVNCSTGMASCPTPLSLA
TTHSQPLQAEVISLNLNTELPSEINQEMDPAHYQPSPCVSHNGFLFKIASMARAITERKN
KEEFCRRWCTLNDGLFSYYDSDKNANPNRSLKISEIVCLAVDLPEKHGYNYTFELYSESE
RLYLFGTSDPDSHKEWVKSIAKSLIPAAAEPLLRLNFERIGKLKYKDGLNLQTSKVGWFA
LVGSTLHAYLESSQGEKIHLRKLNELSIQQDNGVLVLVEKGRTLYIEGERKLDFAGWCGA
IQEAARSGGDTLSEQQLTETDVPVIVLSCIGFITQYGLKSEGIYRKSGVNSRVAALCERF
RRDARSLCLKEGEHQVDDVSNTLKRFFRELEDGLFTSENANMWLTVAASAHENSKISQYK
NLLNQLPHVNKATLQALINHLYCVQCFSDLNQMNLHNLAIVFGPTLFQTDGKDYTAGRAI
EDLIQHYILIFEVDEQQLKKQLEEIKAILMMHDKLNVKFPPRPEFTPAPSFICTVYLEEK
DGTIEQSVQIPGSMTAAELTCEVLDKRNIPFKDKEYWSCWEVCDKEEMERPLHYQERVLA
ILHSLGTDSHLLIKKHPGMDAMLVYLSAKSDASKHGMMKFREERSILGLGLPSGNFHDRY
FILSSSSLRMYKEIRSNRPEREWPTKNLKVYIGIKKKLRAPTCWGLTVVNESKKQEKSER
QQWYLCCDTQSEMKEWLAAFLSFQYDGDVWPQDGLQQTRVSRVLPDARHGNVSLIPLRGS
ENEMRNSVAAFSQDALSLFRDVR
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaatccgaatccagtgcgacagtgttggactggttgggtgtgatacggttggag
cagtacactgacttgtttctgagtgccggtttaaagacaatacaagaatgtcagcatctt
acaccaaatcaactggagcgcatggggattaccctaccaggccaccagagacgcattcta
gctagcttaaacaaaacccagattacgcaggaaactgcacctgtaccacccgaaagagat
cagcaaacatggaggccacagcctgttccaagagaagtaaaaccagaaagtgatggagaa
acaaggatacctgttcctaaaatgcgagacaaaccaattcctaaggaaagacaagtgtac
aaaatgcaagagaactgtaaggaacaaggagaagaaacaggtcttgcccaaaaaaataca
gcacttggagaaggagaacaagaagatggcaatggagaactagacaaggaccagcccaag
cctcaaccaagagaaaggactaagtttcgttcaagtgccccagttgactcttccagtcca
accaatttacccccagtaccccctcgaattacaatcaacttccctccccagtgcttcaca
aattctttggccccctcccagccggccccaggtcctgtttccccaagattggacaaacct
ccattagaacagtgcagatctcttcctgggcgttcaaccccactgttctctggtaattcc
tcagaagttttccctgaaagcctctccatccagtctactccagccaggcctcggacatta
aatattcaacctcctgagccttctgcttttttgaatagcgatggaggtgacaaagcttca
cccatctcacccactaccaacaatatgataaatgctccacctcttcctccaaaagcagga
gttggacctaaaagcccacccccgttaccacagcggttacttgctcagtctcccacacaa
agcccagcacccagcaaaacaggaaccgatgagatacccagaaaccagcctccacaaatc
ccacttcgaagcaagacaccccaaatacaggagaactgcacactgccccctcaggcagac
ctgcagccagctgtcccatccaggagggtcccccaacctccaagtccgctcattttcagt
tctcctgaccatcatcctctaccaggttcggactctgatgacaatacttctgatgagtac
gagagaccagacttcctctgcagtgttcttcaagagaacatggcagacgagaaatcgcgc
ctacaagtgtccagtgacttttgcagtgacgatgaaatgctggatgatgatgactatcat
tccctctggcaagatgggcaagatagtatgaaaggcagtttatatttgccgcacaacatg
tccatgagggaggacatctctcagcaatccactgtcatcaagcagggctggctgagcaag
aatccaccacagggggctctttactaccagaggcgatgggttaggctggactctgattat
ctgcgatactttgacattgaaaaggctgtgtattccaagggaattatctcaactgcgttt
atcactaaagtgacagcggtgggagacctgaagttggaggttgtcacgagcaatcggaca
ttcatcttcaaagctgaaagtgaagatgatagaaatgagtgggtgaatgcactggaggag
tgcaccagggggcgccgtcgcagcagtgtgccgagcccatccttgatgtcagacctccag
ggctatctggagctcagaggattacgctccaaactttacactgttattgtctcagacaaa
gtcttcctctacaaaaacatcgatgattatcacattggagtcggtatcacatccattgaa
atgaacgttggaagtgttaaagaaacagatcgccgcagcttcgatctcatcaccccctac
cgtatattcagtttcacagcagagtctgaacagttgaaagaccagtgggtggacgccatg
aggaacgcaataggcttggcactgtccactagtgaaatagctgagcgaatctgggcggag
ccaagcaacagttcctgtgctgactgcgcggcgccgaagccagaatgggctgccatcaat
ttatgtgtcgtcatctgcaaacgatgtgcaggagaacacagaggacttggtccaagtatc
tctaaagttcggagtttgaagatggacaagaaggtgtggacagaagagctcattcaggtg
ttcttgttgctgggcaacgagcgtgtgaacagtttctgggctgctaacgtcccaccaagt
gaagctctgacgccctctagctgcagcgaagacagacggcgatacatctgtaacaaatat
cgtcagggcaaatacaggaagtatcatcctctctatggtaaccagcaagaactcaatgat
gctctctgtataaacgtgcagtgcagcgacgtgctggaaacgctaagtctgatcttctgc
ggcgcagatgtgaactgctcaacaggcatggcaagctgccccacccccctgtccctggcc
actacacactctcagcccttacaggcggaggtgatcagcctgaacctcaacacagaatta
ccatcagaaatcaatcaggagatggatccagctcattaccaaccatctccatgtgtgtcc
cacaatggcttcctgttcaaaattgcctccatggcacgggccatcacagaacgcaagaac
aaagaagagttctgccgtcgctggtgcacactaaacgatgggctcttcagctactatgat
agtgacaaaaatgcaaaccctaacagatcccttaagatctcagagatcgtctgtctggca
gtggacctgccagaaaagcatgggtacaactacacgtttgaactctactcagagtctgag
aggctctacttgtttggcaccagcgacccagacagccacaaggagtgggtcaaatctatt
gccaagagcttgataccggcagcagctgagccattgttaagacttaacttcgagcgcatt
ggaaaactcaagtataaagacggcttgaacctacaaacatccaaggtcggctggtttgct
cttgtgggctccacacttcacgcttatctggagagcagccaaggggagaagatccatctc
cggaaactgaatgaactctcaattcaacaagacaatggagttctggttctggtggagaaa
ggcaggactttgtacattgaaggagaaaggaagttagactttgctgggtggtgtggagcc
atccaggaagcagcaagaagtggaggagacacgctgagcgagcagcagctcacagagacg
gacgttcctgtcatagttctgagctgcatcggcttcatcacgcagtacggtctgaaatca
gagggcatttatcgcaagagtggtgtgaactctcgcgtggcagccttatgcgagagattc
cgcagagatgctcgcagcctatgcctgaaggagggggagcatcaggtggacgatgtctcc
aacacactcaaacgtttcttcagggaactggaggacgggctgttcacctcagaaaatgcc
aacatgtggctcacggtagctgccagtgctcatgaaaactcaaaaatctctcagtacaag
aacttgttgaaccaacttcctcatgtcaacaaggcaacactacaagctcttatcaaccac
ctgtactgtgtgcagtgtttttctgacctgaaccagatgaacctccacaatctggccata
gtgttcggtcctactctgttccagacggatgggaaggactacactgctgggcgcgccatc
gaggacctcatacagcactacatactcatctttgaggttgatgagcagcagctaaaaaag
cagctggaggagatcaaagccattctgatgatgcacgataaactcaatgtaaagtttcct
ccacgaccggaatttactccagctcccagcttcatctgtactgtgtatcttgaggagaag
gatgggacgatagagcagagtgtgcagattcctggttccatgacggcagcagagctaaca
tgtgaagttctggataagcgtaacatcccatttaaagacaaagaatactggagctgctgg
gaagtctgtgacaaggaggaaatggaacgtcctctgcattatcaggaacgggtcttggcc
attcttcattctttagggaccgactcacatttactcatcaagaagcatcccggcatggac
gctatgctcgtctacttgtccgctaagtcggatgcctccaaacacgggatgatgaaattc
agagaggagcgaagcatcctgggattggggctgccctccgggaatttccacgaccgatat
tttatccttagttcgagctctctcagaatgtacaaagaaattagaagtaaccgtccagag
cgggaatggcccacgaaaaacttgaaggtttatatcggaatcaaaaagaaacttcgcgct
cccacatgttggggtctgactgttgtgaatgagagcaagaagcaggaaaagtctgagagg
cagcagtggtatctctgctgtgacacccaatcagaaatgaaggaatggctcgccgctttc
ctcagctttcagtatgatggtgatgtgtggcctcaggacggactccagcagacccgggtt
agccgcgtgctgcccgacgcacgtcatggtaacgtgtcactgattccgttgcgtggcagt
gagaatgagatgcggaacagcgtagcagctttcagtcaagacgcgctttctctctttaga
gacgtgcggtaa
DBGET
integrated database retrieval system
