Oryzias melastigma (Indian medaka): 112149181
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Entry
112149181 CDS
T07439
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112149181
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112149181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
112149181
NCBI-ProteinID:
XP_024132484
Ensembl:
ENSOMEG00000004980
LinkDB
All DBs
Position
LG13:12104478..12119040
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AA seq
669 aa
AA seq
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MMFRDQVGILTDWFKSWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSGGYPPRPPSSPYHPRQGSDEWPSSA
EALDPGNAWHDKSPSSSTSPAGQNGHMPFPGGMSSPINSNNTGVVGQLQPSPLKKSMSNI
PSSPQACGSEWVSQDDIGGRQNFIPTDHAPLSPQSSVASSGSEQTEEQGSARNTFQEDGS
GMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRER
QSVLRSLEKDILEGGNMRNALQELQQIIITPIKAYSPPSAAQPATETGSSPSEITKTGAE
KESEPFQSHSTPPCDGESSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQLI
EKSLSHEAFTETHKKRLVSWKQQVLKLLRLFPRKAMLDMPAYRQKGWNYGSNSLPTAGSV
SGGVGRRGQRQFQMTPRGLPAGRICLPGGIGGASPRHTLTNPALAGQGRQNLWFANPGGS
NSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSMTEHALG
DGTDRTSTI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctcacagattggttcaaaagttggaacgagtgt
gaacagacggtggcactcctgtccctcctgaagagggtgtctcgcacccaagctcgcttc
ctacacatctgtctggaacactggctggcagactgcacagagatccacatccttgaagct
gaagccaacaatgcagcaattgtcagccagtggcatcaagagccaaaagagaaagtggtg
tccctcctgttgtctcacttgccgctgttgcagccacgtaacagtgaggctaaatgtgag
tacatgaaactgctccagaaggttttgagtcacactattgaaagtagcctatttgtggaa
gaaagccgacagctgctctcctacgcactcatccaccccgccacaacactggatgatcgc
acctcactggccatgtggctcaaccacctggaggaacatctttctggtggctatccgcct
cggcccccatccagcccgtaccacccgcggcaaggctcggatgaatggccgagctcagcc
gaggctctggacccggggaacgcgtggcacgataagtccccttcatctagtacgtctcca
gcaggccagaacggacatatgccttttccaggtgggatgtcctcacccattaacagcaat
aatacaggtgtggtggggcagttgcagcctagccctctgaaaaagtccatgtccaatatt
ccttccagtccccaggcctgtggctcggaatgggtgagccaggatgacatcgggggccga
cagaacttcatcccaacagaccacgcccccctttcaccccagagcagtgtagcttcctca
ggcagcgaacagacagaagagcagggctcggctcgcaacacctttcaggaagacggcagt
ggcatgaaagatgtccctgcgtggttgaagagtctccgccttcataaatatgcatcgtta
ttctcacagatgacctatgaagagatgatgattctcacagagcaacatctggagtctcag
aacgtcacaaaaggagcgcgacataagatcgccttgagtatccagaaactgcgagaacgg
caaagtgtactcaggtctttagaaaaggatattttggaaggggggaacatgcgcaatgct
ctccaagagctgcaacaaatcatcatcacacccatcaaggcctacagcccgcccagtgcg
gcgcagcccgccactgagaccgggagctcgccgtctgaaatcacaaaaaccggagcggag
aaagagtcggagcccttccagtcccacagcacgcccccctgtgatggagagtcctcggcc
acgccgatttcagacggagacattgctggacagttcacccgagtcatgggtaaagtgtgt
acccagcttttggtgtccaggccagatgaggaaaatattagctgttaccttcagcttatt
gaaaaaagtctgtcacatgaggcgttcacagaaactcacaagaaaaggctggtgtcctgg
aagcagcaggtcctcaagctgctgcgcttgtttccccgcaaagcgatgctggacatgcca
gcgtaccgacagaaaggttggaactatgggtcaaactccctccccacagcaggctctgtg
agtggaggtgtaggaaggcggggccaaaggcagtttcaaatgacccctcgaggcctccca
gctgggcgtatatgtcttcctggtgggattggaggagcatctccacgccacacactcacc
aatcctgcgctggctggccagggtagacaaaacctgtggtttgccaaccctggggggagc
aacagcatgccaagtcagagtcgcagctccgtgcagcggacccactcacttcctgtccat
acgtccccacaaaccatgctcatgttccagcagcaagaatgccaagttccaggtgctgac
ctggagatcaaccctacgctggagtcactgtgcctcagtatgacagagcatgccttagga
gacggaacagaccggacatcaacaatatga
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