Oryzias melastigma (Indian medaka): 112149207
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Entry
112149207 CDS
T07439
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112149207 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112149207 (snrpa)
Spliceosome [BR:
oml03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
112149207 (snrpa)
Complex B
112149207 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
112149207
NCBI-ProteinID:
XP_024132527
Ensembl:
ENSOMEG00000013010
UniProt:
A0A3B3C179
LinkDB
All DBs
Position
LG13:15169991..15172431
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AA seq
273 aa
AA seq
DB search
MTTPEVRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNIKMKGQAFVIFK
EINSASNALRSMQGFPFYDKPMRIQYSKTDSDIIAKMKGTYVERERKKEKRKPKPEGTGA
KKAAAAMMAGVPTAMPGMPPMSQAPRMMHIPGQPAYMPPPGMMPPPGMAPGQIPPGAMAP
GQMMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFV
EFDNEVQAGAARDSLQGFKITQTHAMKISFAKK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacaactccagaagtgcgaccgaatcacacaatatatatcaacaacttgaatgaaaaa
atcaagaaagatgagttgaagaaatcactctacgccatcttctcgcaatttggtcaaatt
ttggacattctcgttgctcgaaacataaagatgaagggtcaggcctttgttatcttcaaa
gagatcaacagcgcctcaaatgcactgaggtccatgcagggcttccccttctatgataag
cccatgcgcattcagtattccaaaacggactcggacatcattgcaaaaatgaaaggaacc
tatgtggagcgtgagcgtaaaaaggagaagaggaagcccaagccagagggaacaggagct
aagaaagctgctgcagccatgatggctggagtgcctactgctatgcctggaatgcctcct
atgagccaggcaccacgtatgatgcacattccaggccagccggcttacatgcctcctcca
ggcatgatgcctcccccaggaatggcgcctggccagatacccccaggtgcaatggctcct
ggtcagatgatgcctggccaaatgcctcagcaggttgcagaaaatccgcctaatcacatc
ctcttcctcaccaacctgccagaggagacgaacgagctgatgctctccatgctctttaac
cagttccctggctttaaagaggtgcgtctggtccctggtcgtcatgacattgcctttgtg
gagtttgataatgaggtgcaggctggagcggcccgggattcactacagggattcaagatc
actcaaacccatgccatgaagatctcctttgccaagaaataa
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