Oryzias melastigma (Indian medaka): 112149218
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Entry
112149218 CDS
T07439
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112149218 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112149218 (dhx36)
03012 Translation factors [BR:
oml03012
]
112149218 (dhx36)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112149218 (dhx36)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112149218 (dhx36)
Translation factors [BR:
oml03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112149218 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
DPPIV_rep
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112149218
NCBI-ProteinID:
XP_024132548
Ensembl:
ENSOMEG00000011032
LinkDB
All DBs
Position
LG13:14049354..14077598
Genome browser
AA seq
1050 aa
AA seq
DB search
MSSRFDRGGGRRGRRGGRGHRDNSRERWERGGSSFDQDQGESGPRDRPPPHLKGREIGLW
YARYGAVRRKQADRRSRAVVHMDEAREQHITKLLNSVQNDQLGLRRDGRDARASTSASRQ
TDTRDAAHCYFDGDLPEEEKIKAEVKSEDEEEEEFTAGHRKCATSREAVKNEPPDTWDED
EEKEEKKKIIQKEKDLEYLFQEVVRDQSLDDYLKSDLRNKTFEPKYKEMLKFREKLPSYS
KKEDLVELINSNRVLVVSGETGCGKTTQVTQFILDDYISRGAGSLCRVVCTQPRRISAIS
VAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPSLSSVSHL
VLDEIHERNLQSDVLLIIVKDLLRIRDDLTVILMSATLNAEKFSKYFDNCPMIHIPGLAF
PVEEFLLEDVVEKIRYRPQNQDRRPAWKRGFWQGRQLRSEKEQKEAEYKESWPCYARTLQ
DRYSDSTIETLEVLDSDDKIDLELILALICHIVRSEGEGAILVFLPGWDNISGLNDLLMA
QTMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGG
KIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLDAYQLPE
IMRTPLEELCLQIKILKLGSIGRFLEKALDRPTEKAVNLAIKNLTDLNALDHTENLTPLG
FHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRRTLSR
NSKSDHLTIVYACQGWEEAKRRGARYEREYCWDNFLSANTLQMIHNMKGQFAEHLMHTGF
VSSRDPKDYNSNINSDNEKLIKAVIVAGLYPKVATIRPSHSKKRPGVKVYTQADGKVNIH
PKSVNAEEKEFNYTWLIYHLKMKTSSIFLYDCTEVSPFSLLFFGGDITIQKDEGQETIAV
DQWIVFRSPARIAHLVKSLKRELDSLLQEKISNPAPVNWQNRQSKDCAVITAIIDLITTQ
ERAAGSSGRTWAPAPRGQHIYFNDADDDDD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcggtttgaccgtggaggtggaagaaggggcagaagaggaggtcgcgggcac
agagacaacagcagagagagatgggaaagaggaggctcgagctttgaccaggaccaagga
gaaagtggacctagagaccgtcctcctccacatctgaagggccgagagatcggtctgtgg
tacgcgcggtacggagcagtgaggaggaaacaggcagatcgaagatcgagagctgtggtc
cacatggatgaggccagagagcaacacatcaccaagttactaaattctgtacagaacgac
cagctcggtctaaggagagacggtagagatgcaagagcctccacctccgccagcaggcag
acggacacaagggacgctgctcactgttattttgacggggatttgcctgaagaggagaag
atcaaggctgaagttaaaagtgaggatgaagaggaagaagaattcactgcaggccacagg
aaatgtgccacctctagggaagcggtaaaaaacgagccgcccgacacctgggatgaagat
gaagaaaaagaggagaaaaagaaaattatacaaaaagaaaaagatttggagtacttattt
caggaggtggtcagagaccaatcgctggatgattacctgaaaagtgacttgaggaacaaa
acgtttgagccaaagtacaaagaaatgctgaaatttagagaaaaactaccgtcctacagc
aaaaaagaggatttggtggagctcatcaactccaaccgggttctggtggtgagcggggag
accggatgtgggaaaaccactcaggtgacccagttcatcctggatgactacatcagcagg
ggcgcgggctccttgtgtcgcgttgtctgcacgcagcctcgccggatcagcgccatctcg
gtagctgagcgtgtagctgctgagagggcagagagtgtggggaatgggaattcttgtggt
taccaaatccgcctgcagagccggttaccacggagacaaggttcaatcctgtactgtaca
acaggcatcattcttcagtggctgcgctcggatccgtcgttgtctagcgtcagtcatctg
gttttggatgagattcatgagaggaacctccagtcggacgttttactcatcatcgtgaag
gacttactcagaatccgagatgacctcacagtcatcctcatgagcgccacactgaacgca
gaaaagttttctaagtatttcgacaactgtccaatgatccacatccctggtttggcgttc
ccggtggaagagttcctgcttgaagacgttgtggagaagattagatatcgtccacagaac
caggaccgtcgtccagcctggaagaggggcttttggcagggccgccagctccgatctgag
aaggagcagaaagaggctgaatacaaggagagctggccctgttatgcgcgcacgctgcag
gacagatactctgacagcaccatcgagaccttagaggttttggacagcgatgacaagatt
gatctggagctgatcttggcactgatctgtcatattgtgcgcagtgagggggaaggagcg
atcttggttttcctaccaggctgggacaacattagcggtctcaatgatctgctgatggct
cagaccatgtttagatctgatcggtttgttatcatccccctgcactccctcatgcccact
gtgaatcaaacacaggttttcaaaaggcctccacctggagttcgaaagattgtgattgct
actaacatagctgagacgagcatcaccatagacgacgtcgtgtacgtcatagacggcgga
aagattaaggaaaccaacttcgacaccaacaacaacatcagcaccatgacggcggagtgg
gttagtctcgccaatgccaaacagaggaaaggacgcgcaggcagagtgtgtccaggaaag
tgctatcacttgtacaacgggctcagagccagcctgctggatgcatatcagttacctgaa
attatgaggacgccgctggaggagctctgcttgcagataaagattctgaagctgggctct
ataggtcgattcctggagaaagccctggaccgccccacggagaaggccgtcaacctcgcc
atcaagaacctcacagatctgaatgcactggaccacacagagaacctgacaccgctgggt
ttccacttggcccgtctccctgtggagccccacattgggaagctgatcctgtttggtgct
ctgctgggatgcctggaccccgtcctcaccatcgctgcctcactcagcttcaaagaccct
ttcttcatacccctgggtaaagaaaagatggccgacatgaggagaagaaccctgtccagg
aactctaaaagtgaccacctcaccattgtctatgcctgtcagggctgggaggaagctaaa
cggcggggtgccaggtatgagagggagtactgctgggacaacttcctgtcagccaacact
ctccagatgattcataacatgaagggccagtttgctgagcatctcatgcatacaggcttt
gtcagcagcagagacccaaaagattataattccaacattaactcagacaacgagaagcta
atcaaagcagtgatcgtagccgggctgtatccgaaggtggccaccatcagaccgtctcac
agcaagaagaggccgggggtgaaggtttacacacaggctgacgggaaggtgaacatccac
cccaaatctgtcaacgccgaggagaaggagttcaactacacgtggctcatttaccacctg
aagatgaaaacaagcagtatcttcctgtacgactgcaccgaggtgtccccgttctcgctg
ctcttcttcgggggtgacatcaccatccagaaagacgagggccaggagaccatcgccgtg
gaccagtggatcgtcttcaggtccccggcgcgcatagctcaccttgttaagagtttaaag
agagaactcgactcgctgctgcaggagaaaatcagcaacccagctcccgtgaactggcag
aaccgccagtccaaagactgcgccgtcatcaccgccatcatagacctcatcaccacccag
gagagggccgcgggcagcagcggcaggacgtgggcgcccgcccccagaggacagcacatt
tacttcaacgatgcagacgacgacgatgattaa
DBGET
integrated database retrieval system
