Oryzias melastigma (Indian medaka): 112149299
Help
Entry
112149299 CDS
T07439
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112149299 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112149299 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149299 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112149299 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112149299 (si:ch211-11n16.2)
Membrane trafficking [BR:
oml04131
]
Autophagy
Other autophagy associated proteins
Others
112149299 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
112149299 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
FYVE_CARP1-2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
112149299
NCBI-ProteinID:
XP_024132702
Ensembl:
ENSOMEG00000018659
UniProt:
A0A3B3CIT0
LinkDB
All DBs
Position
LG13:complement(19543513..19554032)
Genome browser
AA seq
652 aa
AA seq
DB search
MSEVLMKETERISMKPEERPGGARSFLLVDEQENLQVRGEAEFVERLSCSDVAGVKVLSI
FGNTGDGKSHTLNHILFGGRTVFYTSKSPSSCTVGVWAAYDPHLRLIALDTEGLLGAAAN
QNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFQFLSSASGAYLKHFTPELRALSSRCGLD
VPLSSLGPAVIVFQETTHTQLLGDDSKVVGYADTLLQKRFHELGLGTEAFSSVQYVGTQT
ITPPTDYSGLLEAVRHQAENSHTRSPRQPAIVFQALEALSERFCGELSDEKMTLYSFFPD
EYFTCSSLCLSCSTRCKNGMNHLRDRVPHMADGLCHYAHQFNNKVLICKRCYEGGREVIV
IPKTSASTDNPWFGLAKYAWSGYVLECGSCGVIYRSRQYWMGNQDPESSVVRSEVKHVWD
GSDAFLSTHQNAAQRVLDGMNFVIQSVSEYGSGPTKAVTAWLTDQVAPPYWRPNVDITAC
HGCQKVFEEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSTAVRVCKDCYRQGGPPDSS
STVCKVEPRGLIARKVTEAAQSTLDLVSTAVDYPLCFVKDVARPDYWVPDQSITQCHQCS
KTFTAAMSKHHCRACGQGVCGPCSTHARPVPSRGWDHPVRVCDSCHARSDSL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtcctgatgaaggagacggagagaatttctatgaagccggaagagcgtccc
gggggcgcgcggagtttcctgctggtagatgaacaggaaaacctgcaggtcagaggcgaa
gctgagtttgtggaaagactgagttgttcagatgttgctggcgtcaaggtcctctccatc
tttggcaacacgggcgatggcaaatcccacacgctcaaccacatcctgtttggcggcagg
acggtgttctacacctccaagtcccccagctcctgcacggtgggggtgtgggccgcctat
gacccccacctcaggttgattgccctggatacggagggactgctgggggcagcggccaat
cagaaccagaggatgcggctcttgctgaaggtcttagccgtgtcggacatagttgtgtat
cgcacgcgcgcagagcgcctccacaacgacatgttccagttcctgagcagtgcatcgggg
gcctacctgaagcacttcacccctgagctgagggcgctgtcctcccgctgtggtctggat
gtgccgctgtcttctcttggacctgccgtcatcgtgttccaggagaccacgcacactcag
ctgctgggtgatgactccaaggtggtgggctacgccgacacgctgctgcagaagcgcttc
catgagctgggtctggggacggaggccttcagctccgtgcagtatgtcggcactcagacc
atcaccccccccacagactacagtgggctgctggaggctgtgaggcatcaagcggaaaac
agccacacgcggtccccacgccagccggccatcgtgtttcaggctttggaggctctgagt
gaacgattctgtggagagctctccgatgaaaagatgaccctctactccttcttcccagac
gagtacttcacctgctcatctctctgccttagctgcagcactcgctgtaagaacggcatg
aaccacctgagggaccgggtcccccacatggctgatggactctgtcactacgcacaccag
ttcaacaacaaggtcctcatctgtaagcgctgctatgaaggaggcagggaggtgatcgtg
atccccaagacctccgcttccaccgataacccctggtttgggctggccaaatacgcttgg
tctgggtacgtgctggagtgcggcagctgcggggtgatttaccgcagtagacagtactgg
atgggaaaccaggatcctgaaagcagtgtggtgcggtccgaagtcaagcacgtttgggac
ggttctgacgcctttctgagcacccaccagaacgccgcgcagagggtcctggacgggatg
aattttgtgatccagtctgtgtctgagtacggttccggcccaaccaaagctgtcaccgcc
tggctcaccgaccaggtggctcccccatactggagacctaacgtagacatcacggcctgt
catggatgccagaaggtgtttgaagaggctgagaggaaacatcactgtcggtcatgtggg
gagggtttctgccacccctgttccagccacaggatgccagtgcctgagaggggctggggg
agcactgccgtaagagtgtgcaaggactgctaccggcaaggggggccaccggactccagc
agcacagtctgtaaggtggagcctcgtggtctcattgctcggaaggtgaccgaggcggcc
cagtctactctggacctggtatccacagctgtggactaccctctatgcttcgtgaaggat
gtggcccgacccgactactgggtcccagaccagagcatcacccagtgccatcagtgctcc
aaaaccttcaccgcagccatgtccaagcaccactgccgggcctgtgggcagggcgtgtgc
ggcccctgctccacccatgccagacctgtcccatctcgagggtgggaccacccggtcagg
gtctgcgacagctgccacgcccgctcagacagtctgtaa
DBGET
integrated database retrieval system
