Oryzias melastigma (Indian medaka): 112149376
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Entry
112149376 CDS
T07439
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112149376
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
DSCAM family
112149376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
Ig_6
V-set_CD47
Interfer-bind
Receptor_2B4
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
112149376
NCBI-ProteinID:
XP_024132799
Ensembl:
ENSOMEG00000014421
LinkDB
All DBs
Position
LG13:complement(16197712..16304144)
Genome browser
AA seq
2096 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVSDQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTLYG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQIG
HNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVAGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNTESVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRTSQYTLSDGSTVSHVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KDGLLLPDNHRQVVFENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIARNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAAILNCSVDGYPPP
KVMWKHAKGALAGIGNPQQYHPVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDTWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMDVTLQAVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTIKEQVELKGLEKFTNYSIQVLAFTQAGDGVRSNVLYIQTREDLPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANPELLFYRIT
HLNHRQQYLIWASAVTTAGRGNFSDKVTVEPAAKAPAKIISFGGTVTTPWMKEVRLPCSS
VGEPTPSIKWTKDSEDTAIPVSVDGQRLILSNGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSTERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTYINS
SHARLNLQGWASGGCPISVVTLEFRPKGTWAWQSVRTNATADVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIAPIKSPLEKNDDVKKLFSIGCPVILVTVGIALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGDDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKR
SEHHDPCPVVPPREASARGLAQRAYHTQGRHVTMDTAKQQSLSMGHSGLSNLTSSGASSG
GATGGAAGGSGSGGMSSSSSSSTLPQRTLTMSGSSAQVAQCAAASAAATAAAASSSSAGG
GAVGATGGTPGGASSSSSKMGGSRDSLLESSSSGLSRLQKQRDGGSGAYSKSYTLV
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacgcggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggccaccggagacgacatttacgatgtgccccatatccgccatgtgcatgccaatggc
accctccagctataccccttctcaccctcagcctataacagcatcatccacgacaacgag
tacttctgcactgctgagaaccaagcaggcaagatacgaagccccagcatccatatcaaa
gcagtgtttagggagccctacacagtccgtgtgtccgaccagcgctccatgcggggtaat
gttgccgtgttcaagtgcctcatcccctccgccgtccaggagtacgtcagcgtggtgtcc
tgggagaaagacactgtttccatcgtccccggtaatcgtttcttcctgactttatatggc
gctttgtatatctcagaagtgcaaaaggaagatgctctttccacataccgctgcatcaca
aagcacaagtacagtggagagactcgccaaagcaatggagccagactttctgttatggac
cctacggagtccaccccgtccgtgttggacagtttccagtctggtgaggtgcagatcggg
cacaacgtggagctaccctgcatcgcctctggatatccgaaccctaccatccgatggtta
aaagatggtcgaccattaccagcagactcccgctggacacgccgcatcactggcctcacc
atctctgacttgagacttgaggacagtggcaattacatctgtgaggttaccaacagcttt
ggctctaaggaggtggcaggtcacctcaatgttattgaaccactcagagtgaccttgtct
cctaagaatctgaagacagggatcagcagtacagtcatcctctcctgtgctgttcaaggt
tccccccactttactgtctcttggtaccgaaacacagagtctgtcctgcccgatcagcac
ttttccatccaaggggctcacaatgagacactgtttatttccgctgcacaaaagagacac
tctggagcttaccagtgctttgccacacgaaaaggccagaccgcccaggacttctctatc
atactgctagaagatggcactccccgcattgttgcctcgttcagtgaacgtgtagtggtc
ccaggcgagccgttttccttgatgtgcgctgccaaaggagcacctccaccgaccatcacg
tggaccctggacgacgaacccgtagctcgggacctgtcccgtgtccggaccagccagtac
acgctttctgatggcagcactgtgagccacgtcaatgtcagcagccctcaaattcgagat
ggaggagtgtatcggtgcgccgcacgaaactcggctggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtccaccaaggattaggcctatgaagaacatcacggcagttgcaggg
agaaacacttttataaactgccgtgtaattgggtatccgtactactcaattaactggtac
aaagatgggctcctgttgcctgacaaccatcgccaggtggtgtttgagaatgggactctg
aagctcagcgatgttcagaaaggcatggacgagggggcttatgtgtgcagcgtgctgatt
caaccgcagctattcatcacgcagactgtctatgtcaccgtcaaagttcctccactgatc
cagccatttgactttccgccgacctccattggtaaattgatgtacatagcctgcgtggtg
tcgtctggagacatgcccatacacattacgtggcgcaaagacggccaggagatcgtgccc
tcctcaggcatcactattgataccaaggagttcatgagctccctccagatatccaaggtg
tcactcaaacacaacggcaactacacctgcatagccaggaatgatgctgccactgtcagc
acagagaggcagctcacagttacagtgcctccgcggtttgttgtgcagcccaacaatcag
gatggaatctatggcaaggcagcaatcctgaactgttctgttgatggctaccctccacct
aaggtcatgtggaagcatgccaagggggcactagcgggaattggaaacccccaacagtac
caccctgtgccgctgacaggccggattcagatcatgaataatggctctctactaatcaga
cacgtcttggaagaggaccgtggcttctacctctgtcaggcctccaatggagtgggctca
gacattagcaagagcatggtcctcacagttaagatcccagcaatgatcaccagtcacccc
aacactaccatggctaagaagggtcatgtgaaggagttgaactgcacagccaggggagaa
tggcccatcatcatccgctgggaaagaggggacaccgttattgaccccgaccgcaaccca
cgatactccataaccactagtcccaatgaaaagacagatgaagtgttgtctacactaaag
ctaaagccagcagagcgtgaggattcagttttcttctcctgtcatgctatcaattcttat
ggagaaggacggggccttattcaactcactgttcaagagcctccggaccccccggaactg
gaggtgcgagaagtgaaggatcgaagtatgaatcttaggtggacccaaagatttgatgga
aatagcattattacctcttatgatattgaatacaaaaacaagacagatacctgggagctt
aagcatgccactcgaaacatctctcccacaaacaatcaggccaacattgtggaccttcac
cccgcctctgtttatagtattcggatgtactcatacaatgccattggaaagagtgaggcc
agcaaggaactcaccatcagcacagaagaagctcagcctgacggccctccaatggatgtg
accctgcaggcagtgacttctcaaagcatcagagtcacctggaaggcgccgaggaaggag
ctacagaacggcgtgattcgaggttaccagattggttatagagagaatggcccaggcagc
aatggccagtacagcattgtggagatgaaagccacaggagacagcgaagtctacaccctt
gacaatctaaagaagtttgctcagtatggagtggtggtccaggccttcaacagagctgga
actggaccttcaagctcagaaatcaatgctacaaccctggaagacgtgcccagtcagccc
cctcagaacgtgcgagccatctctgtcacatccgacgaggcggtgatcacatgggctgag
cctccaagaatgactctgcatggagttttgaagggatatcgggtcgtgttttgggctgtt
ttcccagatggagagtggggtgaaatgcaaaacattacaacgatcaaggagcaggtagag
ctgaaaggcctggagaagttcaccaactacagcatccaggttcttgcgttcactcaggca
ggagatggagtacggagcaacgtcctgtacatccaaacccgagaagacttacctggacct
ccagctggcatcaaagctgtgccctcctctgccagcagtgttgtggtgtcatggttaccc
cctcacaagccaaatggaatcatccgcaagtacacaatctactgctccagccctggctca
ggtcaaccactgccaagcgagtatgaggccaacccggagctgctgttttaccgaatcacc
cacctcaaccaccgacagcagtacctgatctgggcttcagctgtcacaactgcaggtcgc
gggaacttcagtgacaaagtcacagtagaaccagccgctaaggctccagctaaaatcata
tcctttggaggtacggtgaccactccctggatgaaagaggtgcgcctgccctgcagctca
gtaggtgaacccacaccttccataaaatggaccaaagacagtgaggacaccgccatccct
gtgtctgtggatggacagcgccttattttgtccaacgggactctggtgctgcgctccgtt
aaagcggaagactctggctactacacctgcacggccaccaacacgctcggctttgacact
ataatcgtcaaccttttggtgcaagtgcctccagaccagcctcgtctaacagtctccacc
acctccacatcctccattacgcttgcctggataccaggagataacggcggcagctctatc
agaggttttgtgctgcagtactcagtcgataataccgaggaatggaaagacgtgttcatc
agttctactgagcgctccttcaaactggacaacctgcgttgtggaacctggtataaagtg
aaactggcggccaagaacagcgttggtgctggacgaatcagcgagatcattgaagcaaag
actcacggacgagagccccagttcaacaaggatcagcctgtcttcacctatattaactcc
agccatgctcgcctcaacctgcaaggctgggctagtggaggctgtccaatctctgtggtc
actctggagttcagacccaaaggtacgtgggcttggcaaagtgttcggacaaacgccact
gcagacgtgttcctggcagaactgcgtgaggcgacctggtacgaactgaagatgaaagca
tgtaacagtgctggctgtggcaaccagagctcccagtttgcaacactggactatgatgga
agcacgattgctcccattaaatccccgctagagaagaatgatgatgtgaagaagctgttc
tctatcggttgtcctgtgatcctggtcactgtcggcattgcactgctcttcattattcgc
aagaaacgcaaagaaaagaggctgaagagacttagagatgccaagagtctggcagagatg
ttaatcagcaaaaacaaccgcagctttgacacccctgttaaaggcccccctcaaggccct
cggctgcacatcgacatccccagagtacagctgttaattgaagacaaagaaggcatcaag
caaattggtgacgacaaagctacaatccctgtgacagatacagagttcaaccaaaccggg
aatcctcagagcttctgcactggtgtgtctgtccatcaccctgcactcatccagaacact
ggtcctttgatagacatgtctgacatcagaccaggaaccaacccagtgtcgaggaagagt
gtgaagtcagcccacagcatcaggaaccgctactctagtcagtggactctgaccaagtgt
caggcttctacgccagcccgcactctcacttcagactggcgcacagttggctctcagcat
ggcatcactgtcactgagagtgacagctacagtgccagcctctcacaagacacagataag
gggcgcaacagcatggtgtccacagagagtgcctcttccacctacgaggagctggccaga
gcatatgagcatgccaagctggaggaacacttgcaacatgccaaatttgagattacagag
tgctttatttctgacagctcatctgatcagatgaccacaggtaccaatgacaatgcagac
agcatgacgtcgatgagtacgccgtcagagcctggtatctgccgtttcactgcctcgcca
ccaaagccccaagactacgatcgtggcaaaaatgtagccgtgcccattccacaccgcgcc
aagagtgactactgcaacctacccttatacatgaagtcagatccctttttccgaaaacgg
tcagaacatcatgatccatgtcctgtggttccaccacgcgaagcctctgctcgtggcctg
gcccaacgggcataccacacccagggccgtcatgtgactatggacactgcgaagcagcag
tcactcagcatgggccactccggcctatccaacctcacttcctctggagcatcctctggg
ggggcaacagggggcgccgctggaggtagtgggagcggagggatgtcttctagctctagc
agctccacgcttccacagaggactctcaccatgtctggctcctcagctcaggtggctcag
tgtgcggctgcaagcgcagctgccaccgcggcggcagcatcgtcctcctctgctggcggt
ggggcagtgggggccacaggagggacccctggaggtgcttcttcttcttcctctaaaatg
ggaggatctagagactctctcctggagagcagctcctcaggcttgagtagattacagaag
cagagggatggagggtcaggggcctactccaagtcctacacgctcgtgtag
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integrated database retrieval system
