Oryzias melastigma (Indian medaka): 112149378
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Entry
112149378 CDS
T07439
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112149378 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112149378 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112149378 (srsf1a)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
SR proteins
112149378 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112149378
NCBI-ProteinID:
XP_024132801
Ensembl:
ENSOMEG00000004106
LinkDB
All DBs
Position
LG13:complement(11224118..11227701)
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AA seq
245 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVV
VSGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE
GETAYIRVKLDGPRSPSYGRSRSRSRGSRSRSRSRSASRSRSNSRGRGRASPRYSPRHSR
SRSRS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgttgtgcgaggccctgcaggtaacaacgactgccgaatttacgttggaaat
ctacctccagatattcgcacaaaagacgtggaggacgtgttctacaagtatggtacgatt
agagatatcgacctgaagaataggagaggaggaccgccgttcgcttttattgagtttgaa
gacccaagggacgctgacgatgccgtctatggacgcgatggatacgactacgacggatac
aggctgcgcgtggagttcccacggagcgggagaggctccaggggcgggttcggggggata
ggaggagctcccaggggcagatacggaccaccatccagacgatctgaatacagggtcgtt
gtgtcagggcttcctcagagtggcagctggcaggacctgaaggatcacatgcgtgaggct
ggtgatgtgtgctacgctgacgtttacagagatggcaccggggttgtagagtttgtgcgc
aaagaagacatgacctatgccgttcgaaagctggacaacaccaaattccgttcacatgag
ggagagactgcttacattcgtgtgaaattagatggtccccgcagcccaagttacggacgg
tcgcgctcccgcagccgtggcagtcgaagcaggagtcggagtcgcagcgccagccgcagt
cgcagcaattcccgtggccgtggcagagcatcgccccgctactcacctcgtcacagtcgt
tctcgctcccgttcctaa
DBGET
integrated database retrieval system
