Oryzias melastigma (Indian medaka): 112149402
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Entry
112149402 CDS
T07439
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112149402
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112149402
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-TRAF_2
F-box_4
F-box
F-box-like
zf-TRAF
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
112149402
NCBI-ProteinID:
XP_036070928
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Position
LG13:complement(6314580..6317212)
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AA seq
673 aa
AA seq
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MPKGHHEHCDKCFSTRCQVLVKTSRSCTVTRCPRSCGAVLHVCKLEEHSLLCPNETVPCL
NAFSGCSITMPRKKLAKHLEVCPASVVCCSQEWNRWPVSDTNVTFYRRVSEKLQSDSEAG
LDVALALRDQALLFQSIKMKHVFPEMMAEELQMSAAGEPACSSDFSEFTENGCAEEREEE
RCDLAESGEVASLQNYSSWEKVFRKEMEGCNQTVKNLNRQATGKKEQETSKDREEMRDDE
NAVASRGTNGVTGLAPWQDGVLDRLCREANIAEYNMYLVHNGAMLINFGQLAACTPREKD
FVYGNLEPIEVKTVRTYKIPTSFRAKRIDLKDPACKAKTTHQCVDTADLGFSVEDLPKSD
EVSSTLLCSLEKELKGHIISASGSSDGLYEDVGTQTHSFPSAPFRADASLADVVTNKHPG
LLVNVEVESVTRRHNRTSSVFSYECGQFFRRDEFPSHSRNAHCDIQAQLNGWFQQRCPLA
YLGCTFTQTRFHPAGQQATIKFDKDINAMALQPLVPSSLCESDTGRNAARNPDVLSSLPL
EILQNIAAHLDSFTLSQLSLVSHLMREVCASLLQHRGMVFLQWTKKTYSHGGTSWKCHKK
VSNLKISSYFFTIFILCNQGVKTRSNLGISPSSLPVISMLFAMENSHHSCSVSAAALTCK
PSLKMSFGIIYSS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaggccatcatgagcattgtgacaagtgtttcagcactcgctgtcaagtccta
gtcaagacctccaggtcctgcacggtcaccagatgccccagaagctgtggtgccgtcctg
cacgtgtgcaaactggaggagcactctcttctttgtccaaacgagacagtcccttgtctc
aacgcattctccggctgctcgattacgatgccgcggaagaagctggccaaacacttagag
gtctgtcctgccagcgtggtttgctgctctcaggagtggaaccgctggcccgtttctgac
accaacgtgaccttttaccggcgcgtgtcagaaaagcttcagtcagactctgaggcaggc
ctggacgtcgctctggctctcagggatcaagccctgctctttcagtccatcaaaatgaaa
cacgttttccctgaaatgatggcggaggagcttcagatgtcagctgcgggagagccggcc
tgctcttcagacttcagtgaatttacagaaaatggctgtgcggaggagagagaagaggag
agatgtgatttggcagagagcggagaagtggcaagtcttcaaaattacagctcctgggag
aaagttttcaggaaggagatggagggatgcaaccaaactgtcaaaaacctcaacaggcag
gcaacaggaaagaaagagcaagaaacgtcaaaggatcgggaggagatgagagatgacgaa
aatgcggttgcttccagaggcacgaatggtgtaaccggccttgctccgtggcaagacgga
gtccttgatagattatgcagagaagccaacatcgcagaatacaacatgtacctggtgcac
aacggcgcaatgctgattaactttggccagctggccgcatgcacgccaagggagaaggat
tttgtttacggcaatctggagccgattgaggtcaagacagtccgcacttataaaattccc
accagcttcagagcgaaacgcattgacctgaaggatcctgcgtgcaaggccaagaccaca
caccaatgtgtggacactgcagatctgggcttctcagttgaggatcttccaaaatctgac
gaggtcagctcaacacttctgtgctccctggaaaaagagctaaagggccacatcatctcg
gcaagtggttcatcagacggtctctacgaagacgttggaacgcaaacgcacagctttccc
tccgctcccttcagagcagacgcatctttggcagatgtggtcacaaacaaacatcccggc
cttctcgtgaacgtcgaagtcgagtccgtcaccaggagacacaacagaacaagttccgtc
tttagctacgaatgcggccagttcttccgccgtgacgagttcccgtctcactccaggaat
gctcactgcgacatacaggcccagctgaacggctggttccagcagcgctgccctttggca
tacctcggctgcactttcacccagacaaggtttcaccccgcggggcaacaagccaccatc
aaatttgacaaagacatcaacgccatggcgctccagccactcgtcccttcatcactatgc
gaaagtgacactggaagaaatgccgcccgaaatcctgatgtcttgagcagcctgcccctg
gagatccttcagaacatcgcggctcacctggacagcttcacgttgtcccagctatccctg
gtttcccatctgatgagggaagtgtgcgccagtttactgcagcacagaggcatggtcttc
cttcagtggacaaaaaagacatattcccatggaggcacttcctggaaatgccataaaaaa
gtaagcaacctaaagatttcttcttattttttcacaatttttattctgtgcaaccaggga
gtaaaaacaaggtcaaacctcggtattagccctagttcattacctgtcatcagtatgtta
tttgccatggaaaattcccatcactcctgcagcgtgtcagctgctgcactgacctgtaag
ccctctctgaaaatgtcatttggaatcatttatagctcttaa
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