KEGG   Oryzias melastigma (Indian medaka): 112149402
Entry
112149402         CDS       T07439                                 
Name
(RefSeq) F-box only protein 40
  KO
K10315  F-box protein 40
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112149402
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     112149402
SSDB
Motif
Pfam: zf-TRAF_2 F-box_4 F-box F-box-like zf-TRAF zf-U11-48K
Other DBs
NCBI-GeneID: 112149402
NCBI-ProteinID: XP_036070928
LinkDB
Position
LG13:complement(6314580..6317212)
AA seq 673 aa
MPKGHHEHCDKCFSTRCQVLVKTSRSCTVTRCPRSCGAVLHVCKLEEHSLLCPNETVPCL
NAFSGCSITMPRKKLAKHLEVCPASVVCCSQEWNRWPVSDTNVTFYRRVSEKLQSDSEAG
LDVALALRDQALLFQSIKMKHVFPEMMAEELQMSAAGEPACSSDFSEFTENGCAEEREEE
RCDLAESGEVASLQNYSSWEKVFRKEMEGCNQTVKNLNRQATGKKEQETSKDREEMRDDE
NAVASRGTNGVTGLAPWQDGVLDRLCREANIAEYNMYLVHNGAMLINFGQLAACTPREKD
FVYGNLEPIEVKTVRTYKIPTSFRAKRIDLKDPACKAKTTHQCVDTADLGFSVEDLPKSD
EVSSTLLCSLEKELKGHIISASGSSDGLYEDVGTQTHSFPSAPFRADASLADVVTNKHPG
LLVNVEVESVTRRHNRTSSVFSYECGQFFRRDEFPSHSRNAHCDIQAQLNGWFQQRCPLA
YLGCTFTQTRFHPAGQQATIKFDKDINAMALQPLVPSSLCESDTGRNAARNPDVLSSLPL
EILQNIAAHLDSFTLSQLSLVSHLMREVCASLLQHRGMVFLQWTKKTYSHGGTSWKCHKK
VSNLKISSYFFTIFILCNQGVKTRSNLGISPSSLPVISMLFAMENSHHSCSVSAAALTCK
PSLKMSFGIIYSS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgccaaaaggccatcatgagcattgtgacaagtgtttcagcactcgctgtcaagtccta
gtcaagacctccaggtcctgcacggtcaccagatgccccagaagctgtggtgccgtcctg
cacgtgtgcaaactggaggagcactctcttctttgtccaaacgagacagtcccttgtctc
aacgcattctccggctgctcgattacgatgccgcggaagaagctggccaaacacttagag
gtctgtcctgccagcgtggtttgctgctctcaggagtggaaccgctggcccgtttctgac
accaacgtgaccttttaccggcgcgtgtcagaaaagcttcagtcagactctgaggcaggc
ctggacgtcgctctggctctcagggatcaagccctgctctttcagtccatcaaaatgaaa
cacgttttccctgaaatgatggcggaggagcttcagatgtcagctgcgggagagccggcc
tgctcttcagacttcagtgaatttacagaaaatggctgtgcggaggagagagaagaggag
agatgtgatttggcagagagcggagaagtggcaagtcttcaaaattacagctcctgggag
aaagttttcaggaaggagatggagggatgcaaccaaactgtcaaaaacctcaacaggcag
gcaacaggaaagaaagagcaagaaacgtcaaaggatcgggaggagatgagagatgacgaa
aatgcggttgcttccagaggcacgaatggtgtaaccggccttgctccgtggcaagacgga
gtccttgatagattatgcagagaagccaacatcgcagaatacaacatgtacctggtgcac
aacggcgcaatgctgattaactttggccagctggccgcatgcacgccaagggagaaggat
tttgtttacggcaatctggagccgattgaggtcaagacagtccgcacttataaaattccc
accagcttcagagcgaaacgcattgacctgaaggatcctgcgtgcaaggccaagaccaca
caccaatgtgtggacactgcagatctgggcttctcagttgaggatcttccaaaatctgac
gaggtcagctcaacacttctgtgctccctggaaaaagagctaaagggccacatcatctcg
gcaagtggttcatcagacggtctctacgaagacgttggaacgcaaacgcacagctttccc
tccgctcccttcagagcagacgcatctttggcagatgtggtcacaaacaaacatcccggc
cttctcgtgaacgtcgaagtcgagtccgtcaccaggagacacaacagaacaagttccgtc
tttagctacgaatgcggccagttcttccgccgtgacgagttcccgtctcactccaggaat
gctcactgcgacatacaggcccagctgaacggctggttccagcagcgctgccctttggca
tacctcggctgcactttcacccagacaaggtttcaccccgcggggcaacaagccaccatc
aaatttgacaaagacatcaacgccatggcgctccagccactcgtcccttcatcactatgc
gaaagtgacactggaagaaatgccgcccgaaatcctgatgtcttgagcagcctgcccctg
gagatccttcagaacatcgcggctcacctggacagcttcacgttgtcccagctatccctg
gtttcccatctgatgagggaagtgtgcgccagtttactgcagcacagaggcatggtcttc
cttcagtggacaaaaaagacatattcccatggaggcacttcctggaaatgccataaaaaa
gtaagcaacctaaagatttcttcttattttttcacaatttttattctgtgcaaccaggga
gtaaaaacaaggtcaaacctcggtattagccctagttcattacctgtcatcagtatgtta
tttgccatggaaaattcccatcactcctgcagcgtgtcagctgctgcactgacctgtaag
ccctctctgaaaatgtcatttggaatcatttatagctcttaa

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