Oryzias melastigma (Indian medaka): 112149405
Help
Entry
112149405 CDS
T07439
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149405 (lingo2b)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112149405 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
LRR_5
LRR_9
Ig_2
ig
LRR_EndoS
LRR_Zer-1
LRR_6
V-set
LRRNT
C2-set_3
Motif
Other DBs
NCBI-GeneID:
112149405
NCBI-ProteinID:
XP_024132833
Ensembl:
ENSOMEG00000012013
UniProt:
A0A3B3DFZ1
LinkDB
All DBs
Position
LG22:complement(18963588..19018626)
Genome browser
AA seq
613 aa
AA seq
DB search
MRHPAPHRRHLFLGGALLLLLLLNSALSCPARCECSPQTKSVSCHRKRLPSIPEGIPIET
RMLDLSKNKLRAITPDNFSSFLQLEDLDLSDNLISVVEPGSFRFQLALRSLSFRSNVLQL
VSPGVLSGLTNLTHLDLSHNRLVVLLDHAFQDLRRLTSLEVGDNELVFISQRAFTGLLGL
QSLTLERSNLTVVPTDALAHLHNLVELRMRYLSISFLKPFSFKRLPRLRHLEIDYWLWLD
SLPPRSLHGLNLTSLFITNTNLSAFPGAALSNLPYLTHLNLSHCRIQHIHQGVLGQLPYL
MELRLQGAQLASIEPFAFVGLKSLQLLDVSQNRLDSLERAVFASPDTLQRLCLGGNPLVC
DCRMLWLLSSHKPPSLQILDMQPECSAPKHLMGKILRELKEPLVSRYMTCTKPRIRPNVT
QLLVADEGQPARLSCTAEGAPRPSVVWITPHRRYVTTKSSGRVEVQPDGTLEIKAAELHD
TGQYLCIASNPAGNASLSASLNVKSMGLTDRFHYSNRSSNYLADSNSTWGNGTVLYNMTV
PIDIKTIIISTAMGCLSFLGVVVFCFLLLFAWSRGKGRHRNNFDIEYVPRKSNGAAADVA
ETSGPRRVNMKMI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagacatccggccccgcaccgccgccaccttttcctgggcggggctttgctactcctt
cttctgctgaactcagccctgagctgcccggctcggtgcgagtgttctccccagactaag
tcggtcagctgccaccgcaaacgcctgcccagcatccccgaaggcatccccatcgagaca
cgaatgctggacctcagcaagaacaagctgcgcgctatcacgccggacaacttctcttca
ttcctgcagttggaagacctggatttaagtgacaacctcatcagcgtggttgaacctggc
tcatttcgctttcaactcgctctacgctcccttagtttccgcagtaacgtacttcaactg
gtttctcccggtgtgctctctggactgactaacctcacccaccttgacctcagccacaat
cgacttgtggttctcttggatcatgctttccaagatctccgcaggttaacatccctggag
gttggtgacaatgaattggtttttatctctcagcgcgccttcacaggattacttggactt
cagagtttgactttagagcgctccaatctcaccgtggtccccactgatgctttggcacac
cttcataatcttgttgaactacgcatgcgctacctgagcattagtttcctcaagcctttt
tcttttaaaaggttacctcgccttcgccatctggaaatcgattactggctatggcttgac
tcactgccaccccgctcactgcatggcctcaatctcacatccttgtttataaccaacacc
aacctgtctgccttccccggtgctgcactgtccaatctgccctacctcacacacctcaat
ctgtcccactgccgcatccagcacattcaccaaggagtgctgggccagctcccgtacctg
atggagctccgcctccagggagctcaactagcttccatagagccctttgcttttgtgggc
cttaaatcgctacaactactggatgtatcacaaaaccgtctagactctctggagagggcg
gtgtttgcctcaccagacaccttgcagaggctttgtttgggtggaaacccattagtgtgc
gactgtcggatgctttggctgctcagtagccacaagcctccttctctgcagattctggat
atgcagcctgagtgcagcgcacccaagcatctaatggggaaaattctccgtgaactgaag
gagcctttagtctccaggtacatgacctgcaccaagccacggattaggcccaacgtgaca
cagctgctggtagctgatgagggtcagccggctcgtctgagctgcaccgcagagggggca
cctcgaccctctgtggtttggattacaccccacagacgttacgtcacaacgaaaagcagc
ggaagggtagaagtccagccagacggaacactggagatcaaggccgcagagcttcatgac
actggacagtatttgtgtattgccagcaaccctgctggcaacgccagcctgtccgcttcc
ttaaatgtgaaaagcatgggccttacggacaggtttcactatagcaaccggagctcaaac
tatctggcagactcaaacagcacgtgggggaatggaacagtactgtacaacatgacagtc
cccatagacattaagactatcatcatatcaacagctatgggttgcctgtccttcttaggc
gtggtcgtcttctgcttcctgttgctctttgcctggagccgcgggaaaggacgccacagg
aacaactttgacatcgagtatgtacctcgtaaatccaacggggcagctgcagatgtggcc
gagacgagcggcccacggcgagtcaacatgaaaatgatttaa
DBGET
integrated database retrieval system
