Oryzias melastigma (Indian medaka): 112149470
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Entry
112149470 CDS
T07439
Symbol
rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112149470 (rrp8)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
112149470 (rrp8)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112149470 (rrp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
112149470
NCBI-ProteinID:
XP_024132941
Ensembl:
ENSOMEG00000003161
UniProt:
A0A3B3D051
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All DBs
Position
LG13:10655195..10659295
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AA seq
560 aa
AA seq
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MFNEDAEWNDEEDALVLSKSVFGDGQKRTSSSNLTPKTVGKKSLLRTLQTLGSVPEWKSS
NDVQGSDSEAEEAPSPKKRKKKRKKRKPVEKSEEQQNNRDADQPDEDKPALTKKKKKGSK
TENLKKKSTSAGETKDEEITETTKNEPQSSERLSRQQWKNKMKNKRKCTNKYRSKTLEED
VNKGKNANKEDTKKELDSHSSSNNNDNLTQTTGQKKKKDRENKQLKRRNTDRDTNVFSTG
GLKKQKAGDKAQSKNSTLEASDDRIHQDIQELHTKTANDELSPSKRKKVELSKEQSLKKQ
KLRDMLSRHVPEKESPAEQKGSAASGPEEEEKPEEAKLSRSDILRSRMEQRLESARFRYI
NELLYSSSSGDAKRMFQQDPEAFWVYHKGYTSQVQRWPVNPVDQIISYIQKKPPSLVVAD
FGCGDCKIARSVKNKVHSFDLAATCELVTVCDMSKVPLRDASVDIAVFCLSLMGTNLADF
LAEANRVLKNGGVLKVAEVASRFENVRNFITALSSLGFKMVSKDVENTHFHSFEFIKTGN
APKNVKKFGIQLKPCVYKKR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagatgcagaatggaacgatgaagaagacgctttagtgttgagtaaaagt
gtatttggtgacggtcagaaaagaaccagcagctcaaatttgacacccaaaactgtaggt
aagaagagccttctgcggactctgcagacgttaggatctgttccagagtggaagagcagc
aatgatgtgcaggggagtgacagcgaggctgaagaagctccatctccaaagaaaaggaaa
aagaaaagaaagaagagaaaacctgtagaaaaatcagaggagcagcaaaacaatagggat
gccgatcaacctgatgaagacaaacctgcattaacaaagaagaagaagaaaggaagcaaa
actgaaaatctaaagaaaaagtccacatctgctggagagacgaaggatgaagaaatcacg
gaaacaacaaaaaacgaaccacagagttcagagagactgagcagacaacagtggaaaaac
aaaatgaagaacaagagaaaatgtacaaacaaataccgctccaaaactttggaggaggat
gtcaataaaggcaagaatgcaaataaagaggatacaaagaaagaacttgattcacacagc
agcagtaacaacaatgacaacttgactcagacaactggccaaaaaaagaaaaaggacaga
gaaaataaacagctgaaaaggagaaacacagacagagacactaatgtgttttctacagga
gggctaaagaagcaaaaagcaggggataaagctcagagtaaaaacagtacacttgaagct
tctgatgatagaatacaccaggacatacaggaacttcatacaaaaaccgcaaatgatgag
ctatctccctcaaaacgaaagaaagtggagctgagcaaagaacagagtctgaaaaagcag
aagctgcgggatatgctgagccgccacgtccccgaaaaggagagtccagcggagcagaaa
ggctcagcagcttcagggccggaggaggaggagaagccagaggaggccaaactaagccgc
tctgatatcctgcggtcccgcatggagcagcgcttggaatcggctcgttttcgctacatc
aatgaacttctgtacagctcgtccagcggcgacgcgaagcgtatgtttcagcaggaccca
gaggccttctgggtgtaccacaaaggctacacctcacaggttcagaggtggcccgtcaat
ccagtggaccaaatcatctcatacattcagaaaaaacccccctctctggtggttgcagac
tttggatgtggcgactgtaaaatagcccgcagcgtgaagaacaaagtgcacagcttcgac
ctggcagctacctgtgagctggtgacagtttgtgacatgtctaaggttcctcttagagac
gcctctgtggacatcgccgtgttttgtctgtctctcatgggaaccaacttggcggacttc
ttagcagaggccaatagagtcctaaaaaatgggggggtccttaaagtcgcagaggtggca
agtaggtttgaaaatgtgaggaacttcatcactgcgctctcaagtctgggattcaagatg
gtgtccaaggatgttgaaaacactcatttccactcatttgagttcataaaaaccggaaat
gctccaaagaacgtcaagaagtttggaatacagctgaagccttgtgtctataagaaaaga
tga
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