Oryzias melastigma (Indian medaka): 112149482
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Entry
112149482 CDS
T07439
Symbol
gemin4
Name
(RefSeq) gem-associated protein 4
KO
K13132
gem associated protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112149482 (gemin4)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
112149482 (gemin4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Edg1
NBAS_11th
Aconitase_B_N
Motif
Other DBs
NCBI-GeneID:
112149482
NCBI-ProteinID:
XP_024132963
Ensembl:
ENSOMEG00000020772
UniProt:
A0A3B3DVX1
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Position
LG13:20868684..20875128
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AA seq
1107 aa
AA seq
DB search
MNKGSAVLQGAFLLADKLCRPSSLSCVNKSDWSAAGHPILQALQEVCELEGVDSRQRSSW
TKTVVCAVWLKLLSVKEDIERAWRENPFFSFQQSLPEVNHVVLLELVKNASASDVYAGFL
LHLPEDLICMELKRLIEHVKSEPAREDDVCFFLEVWRELWKGQEKAMVRNDESMETMFAK
QVARLTPSSSSLCPQSAKRLKLETQDPPEADVLHILLNALKDMADQVSPSELCFQSLSMS
LDALYTTFLIDREVVLSAQEKMDILCKAIGTRGKNEKLQPELVGEAQKHLRASISPSRFK
VSRMELSEALRIIAELTQSWKNQGLLSVCEGSCSSYSTFLLKQSVQRVLTALEEAPTAAT
EKNQLTALLKSLVLPVTESSPEVHAQVLSAIITHRLEDHESFAALFAREPPWTHCDEGWM
ECLEKNQAAFHQHDAVIGLSTTLMNKLHTENADVSQCRKLMKIIADIFSSLSLEDMNKAL
ASMLRLSSKGFFEFPVPSAVAGGFEQELNMAFNCIIQAGSGAPSAAPQGNLTTAVSLVAR
VAFQNPEGALRSCCHSAVFNKGAFPLMAKILQHLPGLRGQRGGEEDSERNGEKNRTSSLL
CRCLQQTVKDKSLSANEKEQFAKFLGLLMGPNAVDEGKERSFLSPQEVVNTFVLPNLSSV
GSSSVDVELSLQLLHTALSLHVQQETSTPHWLMDCSPFPLLYVLSQIHDQNLRCWEELPK
GGVRLCSMDARELLVSVLTTVGQAVGAEVEATPSSWSRALFWLYNKLEELDWTVRFHLKP
LWGQHFKNEVPSSLLDVCDLPEQEWSGLDLPQYGQGTGLLAWLECCSLSDSLQSTMLSCL
SLDQHQPDHVNMFSKGLLVGLTQILPWCSVSQWSRVLRVLKELIISNRLNVPFSLEYVEY
LPLLDLRQFSCELRVSVLLLRVFQLLCGSSCSHWLSAEGWAHAGRLYAHAVRNMLSSVKA
KLQLPSASAATVSESTPAEPSADPNAPVSLHKDSSVNGQAPPEPGLSKEEYAENKSQEVL
FVLSQLFCHVQHIQVMMPGGQCEPLFLCSLEILSSYEAIMAAFPDSCSPLESDNTRHFFS
TITDNLLNQEMKAVLQQKIAQLVSSAA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtctgcggttctgcagggagctttcctgctggcagacaaactatgtcgc
ccctcatctctatcctgcgtgaacaaatccgactggagcgcggcgggacatccgattctg
caggcgctccaggaagtttgtgaactggagggagttgacagccgtcaacgctcgagctgg
acaaagacggtggtctgtgctgtgtggctgaagctcttgagcgttaaggaggacattgag
agagcgtggagagagaaccccttcttctccttccagcagagtctccctgaagtgaaccat
gtcgtcctgctggagctggtgaagaatgcttcagcttcagatgtttatgcaggttttctc
cttcatcttcctgaagatttgatttgcatggagctgaagaggctgatcgagcatgtgaag
agcgagcccgcaagagaagacgatgtctgcttctttctggaggtgtggcgagagctgtgg
aaaggccaggagaaagccatggttagaaacgacgagagcatggagacaatgtttgccaag
caggttgctcgtctcaccccctcgtcttctagtttgtgtcctcaatctgctaagaggtta
aagctagagacacaagacccaccagaggctgatgttctccacattctcctcaatgctctc
aaagacatggcagatcaggtctccccatcagaactgtgcttccagtctctttccatgtcc
cttgatgctctttatacaacttttctaatagacagagaagttgttctttcagctcaggag
aagatggatatcctgtgtaaagccatcggtaccagaggaaagaatgaaaaacttcaacct
gaacttgtaggagaagctcagaaacatttacgggcttcgatttcaccgtctcggttcaaa
gtcagcaggatggagctgagtgaagctctgaggatcatagcagaacttactcagtcttgg
aaaaatcaaggacttctgagtgtctgtgaaggttcttgctcctcctactctactttcctg
ctgaagcaaagtgtccagagggtcctcactgctctggaagaagctcccaccgcagcgacg
gagaagaaccagctcacggctttgctgaaatctctggttcttcccgtcacagagagcagc
cctgaagtgcatgctcaggtcctctccgccatcatcactcaccgcctggaagaccacgag
agctttgccgccttgtttgctagagaaccgccgtggacgcattgtgatgaaggctggatg
gagtgcctggagaagaaccaagctgccttccatcaacatgatgccgtgatcggcctctcc
accaccctgatgaacaaactacacacagagaacgcagacgtcagccagtgcaggaagctg
atgaaaatcatagcagatattttctccagcctttccttagaagacatgaacaaagctttg
gcttccatgttgagattgtccagtaagggcttctttgaattccccgttccttctgcggtg
gccggagggtttgaacaggagctcaacatggccttcaactgcatcatccaagcaggaagt
ggagcgccctctgctgctcctcaggggaacctgaccacggccgtctcactcgtagccaga
gtggcttttcagaacccagaaggcgccttacgctcctgctgccactcagctgttttcaac
aaaggagcatttccactgatggcaaagatcctgcagcatctgcctggactcagaggtcag
aggggaggagaagaagacagcgagaggaatggagagaagaataggacctctagtctgctc
tgcaggtgcctccaacagacggtcaaggacaagtccctttcagccaatgagaaggaacag
ttcgccaagttcttgggtctgctgatgggtccaaacgcagtggacgaaggaaaggaacgc
agcttcctgtcacctcaggaggtcgtgaacaccttcgtcctgcctaacctttcatctgta
ggttcttcctccgtggacgtggagttgagtctgcagcttcttcacacagctttgtccttg
cacgtccagcaagaaacctccacccctcactggctgatggactgttctccttttcccctc
ctttacgttctctctcagatccacgaccagaacctcaggtgttgggaggagctacccaaa
ggcggtgtacgtctctgctctatggacgccagggagcttctggtgtctgtgctgaccacg
gtggggcaggcggtgggtgcagaggtggaagccacccccagcagctggtccagagctctc
ttctggctctacaacaaactggaggagttggactggacggtccggttccatctgaagccg
ttgtgggggcagcactttaaaaatgaggtgccgtcatcgttgctggatgtgtgcgatctc
cctgagcaggagtggtccggtttggacctgcctcagtatggtcagggcacgggtcttctg
gcgtggctggagtgctgctctctgtccgactcgttgcaatccaccatgttgtcatgtctg
tcgctggaccagcaccagcctgaccacgtcaacatgttcagcaaaggcctgctggtgggt
ctgacccagatcctcccctggtgctccgtctcacagtggagcagggttctgagggtcctg
aaggagctgatcatctccaaccgccttaacgtccccttctctttggaatacgtggaatat
ctgcccctgctggacctccggcagttctcatgcgagctccgcgtgtcggttctcctgctc
cgggtgttccagctgctttgtgggtccagctgctcccactggctgtccgctgagggctgg
gcccatgctggcaggctgtacgctcacgcagttaggaacatgttgagctctgttaaagcc
aagctgcagcttccttcagcgagtgctgcaaccgtctctgagtcaactcctgcagaaccg
tcagcagatccaaacgctcccgtcagtctgcacaaagactccagcgtgaacgggcaggct
cccccagaaccaggactctccaaagaggaatatgcagagaacaaaagccaggaggtcctc
ttcgttctcagccagctcttctgccatgttcaacacatccaggtgatgatgcctggaggt
cagtgtgaacctctgttcctgtgcagtctggagatcctcagttcttatgaggccatcatg
gccgccttccccgacagctgcagcccgttggaaagcgacaacacgcggcacttcttctcc
accatcacggacaacctgctcaaccaggagatgaaggctgtcctgcagcagaagattgct
cagctggtgtcatctgcagcctga
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