Oryzias melastigma (Indian medaka): 112149510
Help
Entry
112149510 CDS
T07439
Name
(RefSeq) cGMP-inhibited 3',5'-cyclic phosphodiesterase A isoform X1
KO
K19021
cGMP-inhibited 3',5'-cyclic phosphodiesterase A [EC:
3.1.4.17
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00230
Purine metabolism
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
112149510
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.17 3',5'-cyclic-nucleotide phosphodiesterase
112149510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDEase_I
Motif
Other DBs
NCBI-GeneID:
112149510
NCBI-ProteinID:
XP_024133007
Ensembl:
ENSOMEG00000017450
LinkDB
All DBs
Position
LG13:18593139..18654178
Genome browser
AA seq
1140 aa
AA seq
DB search
MALDADSGRGSSRGAHEKHPGAELERSGYVRTCVTPLHRDPRSQSWLRVAVTWTCQRVPS
AVCLASISVILAHLLRLVDWDAGSSSSSGNSSGARVQSAAGCAAELLFSACLCVSPLLTL
VCAFFWLWLSLIRCGLLVGGAVFLLAACHLGEAAARSLPRGAEEEQQLLSSTATLVVLGC
LGCGALRVARLGQGVSVLVLISAVRTASVVSLSGVRAGWRPHLAYLLGLLGVLLARYADR
LLPASGTSGTGCCGSVTGAKEEDIPVFKRRRRSSSIAASEMMAHSQSNSKSHRRTSLPCI
PRDQSSGTSVVVDIAVMGEAHGLISDLLADPSLPPNTCSSLKAVSNLLSTQISLQPLHRP
RIPADTRPCSDSEDGPEKAERLALPKRLRRSLPPGLLRRISSTWTTTTSATGLPTIEPGP
VCRDRSASVKHTPDSSDSWNHSLMMTISKSRSMSASCAASVTSNHLYSKPLGRSGLPPSN
ISPLGSPCPSPPLQGTPVPSPTIKTCTVQLPEPAGPQPERTPVSVAPKSHHRALTHSQSA
PSSTTIHWRPPSLCGSCGRPLNSQLNHGGETGGKGHRMVPPDERAVALSDYDSTYDSTYE
TNHSDSSDFAQNEEDGEGGKKPSVGSCRECPAEDIVLHPLLPSPEDTVISVSKTLMTPEL
EPLMSQLNNWNFPIFSLVEKTHGKTGCILSQVSYKLFEDSGLFETFKIPIKEFMNYFNAL
ENGYRDIPYHNRIHATDVLHAVWYLTTQPVPGLPTLRTENGIHTDSANGITPRATSFLAS
RMNCELEEDYGSLAGLIPGLELMALYVAAAMHDYDHPGRTNAFLVATSAPQALLYNDRSV
LENHHAASAWNLFMSQPEYNFLVNLEHVEFKRFRFLVIEAILATDLKKHFDFLTEFNAKV
GDEGVSGIDWTNENDRLLVCQMCIKLADVNGPLKCKELHLQWTEGIINEFYEQGDEEASL
GLPISPFMDRSAPQLAQLQESFITHIVGPLCHSYDNAALMPGRWVDLAEGGLEMDVGKEG
QDTEEEEDTADEEASTGSDTSQQQEAKNTFKRKVFCQITQHLLENHEMWKRLIAAEAPEE
TAAEAPVCISSPTDPITAICEEEEEQVSKEEESAAEGDEREEVPTIEEEEEEEEEEVLPQ
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggccttggatgcagacagcggcagaggttcatcaagaggcgcgcatgaaaaacacccc
ggggcagagctggagcggagcggctacgtgaggacatgtgtcaccccgctgcaccgggac
ccacggagccagtcgtggctcagagtcgctgtgacatggacgtgccagagagtgccgtct
gcagtctgccttgcctccatctcagttattctcgctcatctgctcagattggtcgactgg
gatgcaggcagcagcagcagcagcggaaatagctccggcgctcgtgttcagtcagcggcg
ggctgcgctgcggagctgcttttctctgcgtgtctctgcgtctcgcctcttttgactctc
gtatgtgccttcttctggctctggctcagtctgattcgctgcgggctgctcgtcggcggc
gccgtgttcttgctagcggcgtgccacttaggcgaagccgcggcacggtccctcccgcgc
ggcgccgaggaggagcagcagctgctgtcctccaccgcaaccctggtcgtcctcggctgc
ctgggctgcggggctctgcgggtcgctcggctcggacagggagtttccgtgctcgtcctc
attagcgccgtccggaccgcctccgtcgtctctctgagcggggtccgggccggttggaga
ccccacctggcctacctgctggggctgctgggggttttgcttgcgcggtatgcggaccgg
ctcctgccggcctcagggaccagcgggacggggtgctgtggctctgtgaccggggcgaag
gaggaggacatccctgtcttcaagaggagacggaggtccagctccatagcggcctcggag
atgatggctcacagtcagagcaacagcaagtcccaccgcaggacttcgctgccctgcatt
ccgcgggaccagtcttctgggaccagtgtggtggtggacattgcggtgatgggagaggcc
cacggtttgatctcagacctgctggcagacccctcactgcctcctaacacctgtagctct
ttgaaggcggtcagcaacctcctcagcacccagatcagcctccagcctcttcaccggccc
cgcatcccagcagacacgcggccctgctctgactctgaggacggacctgaaaaggcagaa
agactggcccttccaaagcgtctcaggaggagtctgcccccagggctgctgaggagaatt
tcatcaacgtggacaacaaccacctcagctacagggctgcccaccatcgagccaggccca
gtatgcagggatcgctcagccagcgtcaaacacactccagacagcagtgactcgtggaac
cactcactgatgatgaccatctcaaagagccgctccatgtctgcttcctgtgctgcctcc
gtgacttccaaccacctttacagcaaaccactgggaagatcaggtcttcctccctccaac
atatcacctctgggctctccgtgcccatcacctcccctccagggaacccccgtccccagc
cccacgataaagacgtgtacagtgcaacttcctgagccggctgggcctcagcctgagcgg
acacctgtttctgtggcccccaaaagtcatcacagagccttaactcacagccagagcgcc
ccgagctccaccaccatccactggcggcctccgtccctctgcggcagctgtggcaggcct
ctcaacagtcagctcaaccacgggggagaaactggtggcaaaggacacaggatggtccct
ccagatgagcgcgcagtagctttatcagactatgacagcacctacgacagcacctatgag
accaaccacagtgacagcagtgactttgcacagaacgaggaagatggagaaggaggcaag
aagccctcagtagggagttgcagggagtgtccagcagaggacatcgttcttcacccactt
cttccatcaccagaggacacagtcatttctgtatccaagactctgatgacaccagagctg
gagcctctaatgagtcagctcaacaactggaacttccccatttttagtctggtggagaaa
actcatggaaagactggctgcatcctcagtcaggtttcttataaactctttgaagattct
ggtctttttgaaacctttaagatccccattaaagagtttatgaactacttcaatgctttg
gagaatggatacagggacataccttatcacaaccggatccatgcgactgacgtgcttcat
gctgtctggtacctcaccacgcagcctgtaccaggcctccccaccctgcgaactgagaat
ggaattcacacggactcagcaaacggcattacgcctcgagccacaagctttctggcatca
aggatgaactgtgaactggaggaggactacggttccctggcggggctcatccccggcctg
gagctcatggctctgtatgtagctgcagcaatgcatgactatgaccacccgggaagaacc
aacgcttttttggtagccaccagtgcaccacaggctcttctgtacaatgacagatcggtc
ttggaaaaccatcatgcagcttcagcctggaacctcttcatgtctcaacctgagtacaac
ttcctggttaaccttgaacatgtggaattcaaacgctttcgcttcctcgtcattgaagcc
atcctggccactgacctcaaaaaacatttcgacttcctcacagagtttaacgcaaaggtg
ggggatgaaggagtgtctggtattgattggaccaacgagaacgatcgattgttggtgtgc
cagatgtgcatcaagctagcagatgtcaatggtccgctgaagtgtaaggagctgcacctg
cagtggacagaggggatcatcaatgagttctatgagcagggagatgaagaagccagcctg
ggtcttcccatcagtcccttcatggaccgatccgccccacagcttgcccagctgcaggag
tctttcatcacacacatagtgggacctctttgccactcttatgacaacgccgcgctcatg
ccgggacgatgggtggacctggccgaaggaggtttggagatggatgtggggaaggaagga
caagacacggaggaggaggaggacacggcagacgaggaagcgtcaacgggttcagacact
tcccagcaacaagaagctaaaaacacgttcaaaaggaaagtgttctgtcagatcactcag
catctcttggagaaccatgaaatgtggaaacgtttgatcgctgcagaagctccagaggaa
accgcggctgaggcgcccgtttgcatcagcagtccaactgaccccatcacggcaatatgc
gaggaagaggaggaacaagtgagcaaggaagaggagtccgctgctgaaggggatgaaagg
gaagaggtgccgactatagaggaggaagaggaggaggaggaggaggaagtccttccacaa
taa
DBGET
integrated database retrieval system
