Oryzias melastigma (Indian medaka): 112149577
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Entry
112149577 CDS
T07439
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112149577 (trim59)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112149577 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
TRAF3_RING
MgrB
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
112149577
NCBI-ProteinID:
XP_036070788
Ensembl:
ENSOMEG00000011968
UniProt:
A0A3B3DFS6
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Position
LG13:complement(14771726..14776940)
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AA seq
415 aa
AA seq
DB search
MDSLEEDLTCSVCYQLFSDPRVLPCSHTFCKPCLENLLQASNNYSIWRPLRLPIKCPNCR
SVVELPPAGVDALPSNVSLRAIIEKYQRDEEPRPPSCQEHPRQPLNMYCIQDRQLICGLC
LTVGQHQGHPIDDLQAAFTREKTTPQQLAELSEHRWAEACELGEQLEQEKFRCEDLLRQD
RDDVTQFFHSLALVMAKKKEAYLEVLDKAAAEVSQAYDPLIQRVKELQEEQLELMSLGSS
VEEEEESPLAFLEKVHLFRERVEKFLKAPLPCPIKLSVTPRAADYLQQHWPAMTIGCLEE
APVPAVCCCARHGGVAADGTAARDSWPDQLMAISALLVTLLLTALWLNPFGGADWSHVGQ
LVHSQTGDLLTAVEEAVMWALTTTGVTLQGWGLQLSLLKDEVFQEMAAFFKTPSP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctggaggaggacctgacttgctccgtgtgctaccagctgttctccgacccc
cgggtcctcccgtgctcgcacaccttctgcaaaccgtgcctggagaacctgctgcaggcg
tccaacaattactccatatggcgcccgcttcgcctgcccatcaaatgccccaactgccgc
agcgtggtggagctgcccccggcgggtgtggacgccctgcccagcaacgtctccctgcgg
gccatcattgaaaaataccagagagacgaggagccgcggcctccgtcctgccaggagcac
cccagacagccgctcaacatgtactgcatccaggatcggcagctgatctgcgggctgtgc
ctgaccgtcggtcagcaccagggccaccccatagacgacctgcaggccgctttcaccagg
gagaagaccaccccgcagcagctggccgagctctctgagcacagatgggctgaggcttgt
gaattaggggagcagctggagcaggaaaaatttcgctgcgaggatttgttgaggcaagac
cgggacgacgtgacccagttctttcattccctggcgctggtgatggccaaaaagaaagag
gcgtacctggaggttctggacaaagccgccgctgaggtgtcgcaggcgtacgaccccctg
atccagagggtcaaggagctgcaggaggagcagctggagctcatgtctctgggttcgtct
gtggaagaggaggaggaatccccgctggcgttcttggagaaggtgcatttgttccgagag
agggtggagaagttcctcaaagcgcctctgccgtgtcccatcaagctgtccgtcacgccg
cgcgccgccgactacctgcagcagcactggccggcgatgactattgggtgcttggaggag
gcgcccgtccccgccgtctgctgctgtgcccgacacggcggcgtggcggcagatgggacg
gctgcgcgggactcgtggcccgaccagctgatggctatttctgcgttactggtgacgcta
ctactgacggcgttgtggttgaatccgttcggaggagctgactggtctcacgttggtcag
ctggtccacagccagactggggatctcctcacagcggtggaggaggcggtgatgtgggcg
ttgacgaccactggggtcactttgcaggggtggggcttacagctctctttactgaaggat
gaggtctttcaggagatggcggcttttttcaaaacgccgtctccttga
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