Oryzias melastigma (Indian medaka): 112149618
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Entry
112149618 CDS
T07439
Symbol
stard13b
Name
(RefSeq) stAR-related lipid transfer protein 13 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149618 (stard13b)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112149618 (stard13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
DUF6716
Motif
Other DBs
NCBI-GeneID:
112149618
NCBI-ProteinID:
XP_024133191
Ensembl:
ENSOMEG00000002417
LinkDB
All DBs
Position
LG13:complement(9304228..9386344)
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AA seq
1385 aa
AA seq
DB search
MMETPHQFWTRESPMRSDATSGNPSQNHRGNHRFPDDHGTDGNIHDFRKSLLRFECTNVG
CLKSLCCPESKLATVEISDEAIKSESPDLNEKFPEVLHLETEDFKNIEPASEAIRPTVPR
RILDDVKVCEKQTNSTFSDSGAHSATIAVHESSEVEQPSPDEGMEKNGPHEGFGDEDDDV
SQERLQSNLLLDQQTSKDKEKRKDCVVTDDIISCYGHEADVGASSQEESPQVESPWSESM
NQLMRKLDQLYQDIEEALSASSSPADTPCMTRKKPEGAVLESTLDLNEKVLQRPDGGECQ
SLDRSSASCSLSMGTRERTNKTMSKMMTTASNSEIEAKEACDWLRAAGFPQYAQLFEDSQ
FPIDIRPVKRDHDFLDKDLVEPLCRRLNTLNKCASMKLDVNLPKKKGEDSDEEDVFAISD
KWTFEWSSRRWSRLQDIDCLLQNHREGQTFRDGVPLRTTTSSESVLTDLSEPEVSSLHSE
SSGGSAHRGLSTEDSDCSNRTDSAAMPDSTSLTMPHIPPNFSHYGSLPNKHSKTSRARAK
DFLKRMETLGSKGTLGKSQKLVISAPVMQQEAQALKTLRCVEIINGAPEPPSSKLSPPQS
SSEGSSHSGGSTVSTPSLKERKPHSADHKRGGMYLEDVDIFTGTDMSKVTEQNRKNDFCS
YEDLVVHIPKDHKPGTFPKALSIESLSPTNGTTINWHTGSMHLDSTLISCRKESKRPTQC
SSRGSRVSIYDNVPGSHLYASTGDLMDLEKEDLFSHLDDILLHVNGLQQIVDHWSKNVLP
GGEGLIQGDSEREEAGCMQSASQITLDFEGNSVAESQTTPTDVDRDKVSLVEAESATLRE
RRDSGVGASLTRPKRLRWPSFQISNRISHSVASLQITNQSASQLSLLQKFSLLRLTAIME
KYSMSNKHGWTWSVPKFMKRMKVPDYKDKNVFGVPLIVHVQRSGQPLPLGLQQALRYLRS
RCLDQVGLFRKSGVKSRIQALRQMNESSADNVNYEDQSAYDVADMVKQFFRDLPEPLLTN
KLGETFLHIYQYVPKDQRLQAVQAAIMLMSDENREVLQTLLCFLSDVTSSVEENQMTPMN
IAVCLAPSLFHLNLLKKDNLSPKAMQKKYATGRPDQKDLNENLAATQGLAHMIIECNRLF
EIPHEMVTQSRNSYVEADLHAPTIQELCKQLEDDDGTYQTHMEGRLQNLLKEAREKSKSW
VSCCSSDNTELHYKKVGDGNPLRRWRVSVEVEAPPSVVLNRVLRERHLWDMDLHQWKVCE
SLDKQTEVFQYVLNSMPPHPSRDFVVLRSWRTDLPKGACSLVSVSVEHEECRTIGGVRAI
VLESNYLLEPCGSGKSRLTHLCRIDLKGRTPDWYNKAFGHLCAAEAARIRNSFQPLISDG
PETKI
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatggagactccacatcagttttggacacgagaaagcccaatgaggagtgatgctacc
tcaggtaacccctcgcaaaaccacagagggaatcaccgtttccctgacgaccacggaaca
gacgggaacatccacgattttaggaagagccttcttcgttttgagtgtaccaacgtaggg
tgtttgaaaagtctttgctgtccggagtctaagctagccacggtggagatttctgatgaa
gcgatcaagtcagaatcgcctgatttgaacgagaagtttccagaagtcctgcaccttgaa
acagaggattttaagaatatagaaccagcatcagaagctattcgcccaacagtcccacgg
agaatcctagatgatgtgaaggtgtgtgagaaacagacaaactcaactttttcagacagc
ggcgcccactccgccactatcgctgtccacgagagctccgaggttgaacaaccatcaccg
gacgaggggatggaaaagaacggcccacatgagggcttcggagatgaggatgatgatgtt
tcacaagagcgacttcagagtaaccttttacttgatcaacaaacaagtaaagacaaagaa
aagaggaaggattgtgtggtaactgacgacataatcagctgttacggtcatgaagcggat
gtaggagcgagcagccaggaggagtctccgcaggtcgagtccccctggtcagagtcaatg
aaccagctgatgaggaaactcgatcagctatatcaggacatagaggaagctctaagtgca
agctcatccccagctgacacgccctgcatgactcgcaagaaaccggagggtgctgtttta
gagtctacactggacctaaatgaaaaagttcttcaaagaccggatggaggggaatgtcaa
agcttagacagatcttctgcttcttgcagtctctccatgggaacaagggaacgaaccaat
aagacgatgtccaaaatgatgactactgcatccaattcagaaattgaagcaaaagaggcg
tgtgactggctgcgggcagcaggatttccccagtatgctcagctctttgaagattcccaa
ttccccattgacataaggcctgtgaaaagagatcatgactttctggacaaggatcttgtg
gaacctctgtgcagacgactcaacactctgaacaagtgtgcctctatgaaacttgacgtg
aatcttccaaagaaaaaaggagaagactctgatgaagaagacgtgtttgctatcagcgac
aaatggacctttgagtggagcagccggcgttggtccagattacaggacattgactgtctg
cttcaaaaccacagagagggtcagactttcagggacggcgttcctctcagaaccacaaca
agcagcgagagtgttctgacggaccttagtgagccggaggtctcctctttgcacagtgaa
agcagtgggggcagcgctcacagaggactcagcacggaggactctgactgctccaaccga
actgattctgcagctatgccagactctacttctctcacaatgcctcatatccctcccaat
ttttctcactatggctctttacctaacaaacacagcaagacgagtcgcgcacgtgccaaa
gacttcttgaaacgcatggagacacttgggtccaaaggaaccttaggaaagagtcagaag
ttggtcatcagcgcccctgtgatgcaacaggaagcccaggcccttaaaactctacggtgc
gtcgagatcatcaatggagctccagaaccaccatcaagcaaactttccccacctcagtcc
agcagtgagggcagcagccattctggtggcagcacggtcagcactcccagcctgaaagaa
cgaaagcctcacagtgccgaccacaagcggggcggcatgtatctggaggacgtagacatc
tttacaggtaccgacatgagcaaagtcacagagcaaaaccgaaaaaatgacttctgctcc
tatgaagaccttgtggtccacattcctaaagaccataaaccgggaacctttcccaaagca
ctatccatagaaagcttgtccccaaccaatggaactactattaactggcatactggcagc
atgcacctggactccacactgatttcatgcaggaaggagtccaaacgtccaacccagtgc
tcctccagaggcagccgagtcagcatttatgataacgttcctggctctcatctgtatgcc
agcactggagatctgatggatctggagaaggaggacctgttttcacacctggatgatatc
ctgctgcatgtcaatggtctacagcagatagtggatcattggtccaaaaatgttttacct
ggaggagaaggcctcatccagggagacagtgagagggaagaagcaggttgtatgcagtct
gccagtcagatcactttagactttgaaggaaattccgttgcagaaagtcagaccacgccg
actgatgtagaccgtgacaaagtctcattagttgaggcagaatctgcaacactcagagag
agaagagattcaggagttggtgcttctcttacaagacctaaaaggttaagatggcccagc
tttcagatctccaatcgaataagccactcagttgcatccctgcagatcacaaaccagtca
gcaagccaactgagtttgttacagaagttttctctgctgcgtcttactgcaatcatggaa
aagtactccatgtcaaacaagcacggatggacatggtctgtgccaaagtttatgaagaga
atgaaggtaccagactataaagacaaaaatgtgtttggagtgccgctcatagtgcacgtg
cagcgctccggacagcctttgcctcttggcttgcagcaggccctgcgatacctgaggagc
cgatgtcttgaccaggtgggtttgtttcgcaaatcaggtgtgaagtcccgaattcaggcc
ctgaggcaaatgaatgaaagctctgctgataacgtgaactatgaagaccagtcggcctat
gatgtggctgatatggtgaagcagttcttcagagatttacccgaacctttactcaccaac
aagctgggggagacattcctccacatctaccagtatgtgccaaaggaccagagactgcag
gccgtccaggctgcaatcatgctaatgtcggatgaaaaccgagaagtgctgcagacgctc
ctctgtttcctcagcgatgtcacctcgtctgtggaggagaatcagatgacacccatgaac
atcgccgtgtgcctcgccccctctctattccacctcaatttgctgaagaaagacaatctc
tcaccaaaggccatgcagaagaaatacgccaccggcagaccagaccagaaggacctgaat
gaaaacttagcagcgacacagggcctcgctcacatgatcatagaatgcaaccgtctcttt
gagatacctcatgagatggttacacagtcgcgcaattcctatgtggaggctgacttacac
gcgccgacgattcaggagctgtgcaagcagctggaggatgatgatggaacgtatcaaaca
cacatggaaggaaggctccagaaccttctgaaagaagctcgggagaagtctaaatcctgg
gtgtcatgctgcagctctgataacacggaacttcactataagaaggtgggagatgggaac
cccctgcgacgctggagagtgtcagtggaggtggaggcgccaccctctgtggtgttgaac
cgagtgctgcgagagcgccacctgtgggacatggacctgcatcagtggaaagtgtgtgag
agccttgacaaacagaccgaggtgtttcagtacgtcctcaacagcatgccccctcatccc
agcagggactttgttgttctcaggtcgtggaggacagacttgccaaaaggagcttgctcc
ctggtttccgtgtccgtagagcacgaggagtgccgtaccattggaggggtgcgcgctata
gtcctggagtccaactacctgcttgaaccctgtggctcaggaaaatccaggctaacccac
ctttgcagaattgacttaaaaggacggactccagactggtacaacaaagcgtttggccat
ctctgtgctgcagaagctgctcgaatccgcaactcctttcagccgctaatctctgatggc
ccagagaccaaaatctga
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integrated database retrieval system
