Oryzias melastigma (Indian medaka): 112149623
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Entry
112149623 CDS
T07439
Symbol
nkx2.2a
Name
(RefSeq) homeobox protein Nkx-2.2a isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112149623 (nkx2.2a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112149623 (nkx2.2a)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Pep1_7
Motif
Other DBs
NCBI-GeneID:
112149623
NCBI-ProteinID:
XP_024133204
Ensembl:
ENSOMEG00000015121
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Position
LG22:17307798..17318533
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AA seq
281 aa
AA seq
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MSLTNTKTGFSVKDILDLPDTNDEEGSITGAEEDTEGSDTTSTTKTTGVLVQSPLENVQN
LPLKNPFYDSSDNPYTRWLATTDSIQYSFFLPFLAAVHGLSASAQDSAKSPEPSADDESP
DNDKETSSSGGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQ
VKIWFQNHRYKMKRARAEKGMEVTHLPSPRRVAVPVLVRDGKPCHTLKAQDLAATFQAGI
PFSAYSAQSLQHMQYNAQYSAAATPQFPTAHHLVQTQQWTW
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaccaacacaaagacgggcttttctgtaaaggacattttggaccttcccgac
acgaatgatgaagagggatctatcaccggagcggaggaggacacggagggatcggacacc
acgtccacgacaaaaaccactggagttttggtgcaaagtcctctagaaaacgttcaaaat
ctgcctttaaagaaccccttttatgacagtagtgacaatccttatacacgatggcttgcc
acgacggacagtattcagtattcattctttctcccgtttcttgccgcagtgcacggtcta
tccgccagcgcgcaggactcagccaagtccccggagccgtccgcagacgacgagtcgccg
gacaatgacaaggaaacttccagcagcggcggcagcgactccggcaaaaagcggaaaaga
agggtgttgttttccaaggcgcaaacgtacgagctggagcgccgcttccggcagcagagg
tacctgtccgcgccggagagggagcacctggccagcttgattcgcctcaccccgacccaa
gtgaagatctggttccagaaccaccggtataagatgaagagagcccgggccgagaaaggt
atggaagtgacccatctcccttctcccaggcgggtggccgtgcccgtcttagtcagggat
ggaaagccttgtcacactcttaaagctcaggacttggcggccacttttcaggccgggatc
cctttctcggcgtatagtgcccagtcgctccaacacatgcagtataacgcgcagtacagc
gccgcggccacgccacagttccccacagcacatcacttggtgcagacgcaacagtggact
tggtga
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